{"id":"W2129822486","doi":"10.1111/j.1365-294x.2010.04948.x","title":"Species abundance distributions and richness estimations in fungal metagenomics - lessons learned from community ecology","year":2010,"lang":"en","type":"article","venue":"Molecular Ecology","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":187,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"McGill University","keywords":"Biology; Relative abundance distribution; Species richness; Phyllosphere; Ecology; Abundance (ecology); Community; Relative species abundance; Ecosystem","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002055766,0.0001207281,0.0002076558,0.00002523197,0.0004310801,0.00004952696,0.0002299553,0.0001839929,0.002219358],"category_scores_gemma":[0.0004675137,0.00006687776,0.00005045984,0.0001866738,0.00005986651,0.00007328024,0.0001267725,0.0006682728,0.0001325449],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002535447,"about_ca_system_score_gemma":0.00001590199,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002423614,"about_ca_topic_score_gemma":0.07415512,"domain_scores_codex":[0.9990146,0.0002841579,0.0001951004,0.0002070822,0.00004703045,0.0002520177],"domain_scores_gemma":[0.9976074,0.002101304,0.00006942356,0.0001029919,0.0000409696,0.00007798051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00002235052,0.0002549642,0.2969682,0.000002580449,0.00002856701,0.00003817602,0.0001174443,0.0000435123,0.6719369,0.02727841,0.0003969215,0.002912045],"study_design_scores_gemma":[0.00008707501,0.00009138624,0.9597849,0.000003656365,0.0000277766,0.00004478396,0.0001831718,0.0004711294,0.002679926,0.01747284,0.01898737,0.0001660442],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9904994,0.0000484417,0.0001335378,0.005369872,0.0003483057,0.0001413952,0.002343598,0.00003543006,0.001079997],"genre_scores_gemma":[0.9969358,0.000111888,0.0004507123,0.0002444483,0.00004582137,0.00003641511,0.002056604,0.000001197364,0.0001170912],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6692569,"threshold_uncertainty_score":0.9986928,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03050484771818754,"score_gpt":0.2540918847825064,"score_spread":0.2235870370643189,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}