{"id":"W2130048636","doi":"10.1186/1742-4690-8-47","title":"Differential effect of CLK SR Kinases on HIV-1 gene expression: potential novel targets for therapy","year":2011,"lang":"en","type":"article","venue":"Retrovirology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Ontario HIV Treatment Network","keywords":"Viral replication; RNA; Biology; Kinase; Gene expression; Virology; Virus; P-TEFb; Gene; Cell biology; Promoter; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001207906,0.0002282571,0.0004544174,0.0001340971,0.0001336803,0.000003178652,0.0002329682,0.0003343537,0.001926963],"category_scores_gemma":[0.00006425448,0.0001543212,0.000222029,0.00004340491,0.0002736147,0.0000300982,0.00006712294,0.0001984623,0.0003311147],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002212115,"about_ca_system_score_gemma":0.0000305578,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002968583,"about_ca_topic_score_gemma":0.000002336274,"domain_scores_codex":[0.998566,0.0002673485,0.0002379748,0.0003699676,0.0000492519,0.0005094303],"domain_scores_gemma":[0.999204,0.0002551972,0.0001147469,0.0003394704,0.00004324993,0.00004333103],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.009988325,0.0007049792,0.005192133,0.00001835335,0.0003369256,0.00001560039,0.00009548621,0.000001156275,0.9774965,0.0001270268,0.001685701,0.004337796],"study_design_scores_gemma":[0.00814615,0.01065322,0.01522682,0.000008869471,0.00004348403,0.00003118969,0.000005283843,0.000001832246,0.9630975,0.00003929065,0.002625894,0.0001204831],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947219,0.001114937,0.002166755,0.00006193571,0.0005735222,0.0006177215,0.0004089446,0.00003893606,0.0002952766],"genre_scores_gemma":[0.9982361,0.0001592695,0.0002162544,0.0000452543,0.00007618569,0.0001689108,0.0005099914,0.00002309474,0.0005648927],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01439904,"threshold_uncertainty_score":0.9989854,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0217066065368252,"score_gpt":0.2567239458012174,"score_spread":0.2350173392643922,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}