{"id":"W2130066723","doi":"10.1128/jb.01318-07","title":"Functional Characterization of Bacterial Oligosaccharyltransferases Involved in O-Linked Protein Glycosylation","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":153,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; Alberta Glycomics Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Glycomics Centre; University of Bristol","keywords":"Biology; Glycosylation; Glycan; Biochemistry; Periplasmic space; Escherichia coli; Glycoprotein; Pilus; Microbiology; Neisseria meningitidis; Peptide sequence; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001675931,0.0003603383,0.000187714,0.0001806472,0.00008588886,0.0002603333,0.000126063,0.0002071656,0.0003988263],"category_scores_gemma":[0.0002980707,0.00007152411,0.0002296705,0.0001859857,0.0001848993,0.0002007837,0.0001681553,0.0003140341,0.0002466156],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003014866,"about_ca_system_score_gemma":0.00024359,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001320561,"about_ca_topic_score_gemma":0.0007829689,"domain_scores_codex":[0.999882,0.00002443963,0.00001288517,0.0000160745,0.00003605934,0.00002853895],"domain_scores_gemma":[0.9998736,0.00003180463,0.00002654459,0.00001864232,0.00002070764,0.00002855531],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004128046,0.00002054203,0.0003456234,0.00002229387,0.000002906639,0.00003205615,0.00000967968,0.00004831111,0.9981155,0.00005447269,0.000009108529,0.001298212],"study_design_scores_gemma":[0.00000755506,0.0001749421,0.006562995,0.000005302818,0.00001736586,0.0002605601,0.00003947966,0.0005761829,0.9896663,0.00006098685,0.002623476,0.000004800204],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954267,0.0007761985,0.002764073,0.00006884014,0.00001163023,0.00002229575,0.0003034891,0.00001718727,0.0006095418],"genre_scores_gemma":[0.9896945,0.0008746253,0.005203658,0.00005626162,0.000008299459,0.00002514268,0.002249024,0.00002187273,0.001866529],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001320561,"threshold_uncertainty_score":0.002625704,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01799939572354665,"score_gpt":0.262802206039797,"score_spread":0.2448028103162504,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}