{"id":"W2130179023","doi":"10.1007/s00239-010-9322-6","title":"A Deviant Genetic Code in the Reduced Mitochondrial Genome of the Picoplanktonic Green Alga Pycnococcus provasolii","year":2010,"lang":"en","type":"article","venue":"Journal of Molecular Evolution","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Genome; Mitochondrial DNA; Gene; Genetics; Codon usage bias; Genome size; Genome evolution; Genetic code; Chloroplast DNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009259747,0.0001900308,0.000293398,0.0004584645,0.0003172041,0.0003709698,0.0003444541,0.000465104,0.0005837454],"category_scores_gemma":[0.0003365797,0.0002188568,0.0002501286,0.0003805497,0.0004063371,0.0002019921,0.0004138807,0.0006488292,0.0002304439],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002814415,"about_ca_system_score_gemma":0.0002582013,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001006547,"about_ca_topic_score_gemma":0.001649633,"domain_scores_codex":[0.9998691,0.00001437793,0.00001096008,0.00005008705,0.00003577434,0.00001965017],"domain_scores_gemma":[0.9996075,0.00008398517,0.0001132338,0.00007697922,0.00004602253,0.0000723869],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001116176,0.00001062431,0.002430942,0.00002916244,0.000009501016,0.00009464179,0.00005139636,0.000116109,0.9953436,0.000226571,0.00001299648,0.001562852],"study_design_scores_gemma":[0.00008449401,0.000598069,0.5862243,0.00003807165,0.0002200998,0.00302736,0.0004841689,0.004806245,0.3992216,0.001757112,0.003464953,0.00007347998],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987318,0.00009462675,0.000705689,0.00003416574,0.000006352476,0.000002672298,0.0001420961,0.000022792,0.0002597939],"genre_scores_gemma":[0.9983317,0.00005430174,0.0008003838,0.00003864189,0.000007910512,0.00000649495,0.0003764909,0.00002356439,0.0003604348],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001006547,"threshold_uncertainty_score":0.002041996,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005649263075635274,"score_gpt":0.2178217298664583,"score_spread":0.212172466790823,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}