{"id":"W2131013961","doi":"10.1016/j.jmb.2008.12.018","title":"The Helicobacter pylori CagD (HP0545, Cag24) Protein Is Essential for CagA Translocation and Maximal Induction of Interleukin-8 Secretion","year":2008,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Secretion; Periplasmic space; CagA; Biology; Mutant; Pathogenicity island; Effector; Microbiology; Gene; Cell biology; Biochemistry; Chemistry; Virulence; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001876571,0.0003605689,0.0002801779,0.0002282173,0.0001861471,0.0004170996,0.0001525384,0.0002557137,0.001157964],"category_scores_gemma":[0.0002676637,0.000244797,0.0003502981,0.0001443179,0.0002839729,0.0002470013,0.0004131575,0.0004194679,0.0006346467],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002900568,"about_ca_system_score_gemma":0.0001834643,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002864338,"about_ca_topic_score_gemma":0.0002808928,"domain_scores_codex":[0.9997836,0.00004568811,0.00002298272,0.00003308571,0.00004021609,0.00007452361],"domain_scores_gemma":[0.9997266,0.00005681176,0.00005285928,0.00004115436,0.00002421584,0.00009829813],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002006306,0.00003212696,0.0003070604,0.00001861404,0.000002377656,0.00006773481,0.000009398762,0.00001578955,0.9986225,0.00002926303,0.00003197297,0.0006624672],"study_design_scores_gemma":[0.00004937802,0.0004409154,0.02289533,0.000008370708,0.00000962961,0.0006468364,0.00006197516,0.0006171443,0.973554,0.00007546286,0.001635463,0.00000562718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955744,0.001420364,0.001742568,0.000108124,0.00003556396,0.00002607499,0.0003050809,0.000074764,0.0007130403],"genre_scores_gemma":[0.9962813,0.0002183406,0.001408974,0.00003693292,0.00001215351,0.00002105199,0.000952558,0.00002132381,0.001047385],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001157964,"threshold_uncertainty_score":0.003873765,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01511247708999957,"score_gpt":0.2717577880419337,"score_spread":0.2566453109519342,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}