{"id":"W2131569339","doi":"10.1016/j.virusres.2009.06.011","title":"Probe binding to host proteins: A cause for false positive signals in viroid detection by tissue hybridization","year":2009,"lang":"en","type":"article","venue":"Virus Research","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Huazhong Agricultural University; Ohio State University; University of Guelph; National Science Foundation","keywords":"Biology; Viroid; In situ hybridization; Computational biology; Nucleic acid thermodynamics; Molecular probe; Plant virus; Gene; Molecular biology; RNA; Genetics; Messenger RNA; Virus","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01192627,0.002369256,0.001837298,0.002612389,0.001749584,0.001653804,0.002303886,0.005031093,0.003031949],"category_scores_gemma":[0.01660845,0.002253055,0.0009723178,0.0009684773,0.002073438,0.002073665,0.001558303,0.003916196,0.002656166],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008402682,"about_ca_system_score_gemma":0.0004780901,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005735589,"about_ca_topic_score_gemma":0.0006673431,"domain_scores_codex":[0.9856461,0.006680449,0.0009963874,0.00214917,0.003571074,0.0009568539],"domain_scores_gemma":[0.9772357,0.01755353,0.0007965227,0.002534108,0.001389179,0.0004909717],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003247677,0.0001227515,0.004536406,0.0003481415,0.00005962137,0.0018005,0.0004014956,0.0001769644,0.9816151,0.0009483253,0.0004331654,0.009232674],"study_design_scores_gemma":[0.00001637887,0.0002273639,0.003329325,0.0000252144,0.0001084918,0.004912796,0.00008228508,0.003868222,0.9846912,0.0006554166,0.002066188,0.00001709411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.53951,0.004681486,0.4423622,0.001494177,0.0007263808,0.0004138588,0.0001518625,0.002660226,0.007999831],"genre_scores_gemma":[0.8324426,0.001432909,0.1545682,0.001497474,0.0001318405,0.0004579932,0.0005531052,0.0008172377,0.008098682],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01192627,"threshold_uncertainty_score":0.06307292,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08312880472882801,"score_gpt":0.3658778632622793,"score_spread":0.2827490585334513,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}