{"id":"W2131596454","doi":"10.1111/j.1574-6976.2000.tb00547.x","title":"The phylogeny of proteobacteria: relationships to other eubacterial phyla and eukaryotes","year":2000,"lang":"en","type":"review","venue":"FEMS Microbiology Reviews","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":347,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Phylum; Proteobacteria; Phylogenetics; Evolutionary biology; Chloroflexi (class); Genetics; Phylogenetic tree; Convergent evolution; Bacteria; Gene; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000266144,0.0002443462,0.0002534546,0.0009331403,0.0004447711,0.000865889,0.0002343759,0.0003544822,0.001220295],"category_scores_gemma":[0.0005940577,0.0001285078,0.0001658508,0.001325099,0.0003059089,0.0006300882,0.0004434334,0.000344244,0.001001586],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002096233,"about_ca_system_score_gemma":0.0002726605,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009810294,"about_ca_topic_score_gemma":0.0008160371,"domain_scores_codex":[0.9998174,0.0000453258,0.00001414579,0.00004618668,0.00003988142,0.00003699835],"domain_scores_gemma":[0.9997628,0.00004263673,0.00006540491,0.00001867153,0.00006011166,0.00005037465],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001290114,0.0001052605,0.2214869,0.00203197,0.0003210768,0.001101536,0.002546646,0.003029173,0.3983631,0.007874975,0.001724153,0.360125],"study_design_scores_gemma":[0.00004696517,0.000376478,0.8515521,0.000486578,0.0001887151,0.003538484,0.001502296,0.003755651,0.01402696,0.008131484,0.1163385,0.00005575971],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.9091759,0.05769379,0.01772179,0.0007136607,0.00008351695,0.00005032498,0.001089783,0.0002432233,0.01322796],"genre_scores_gemma":[0.9621345,0.01910366,0.01456785,0.0003186064,0.00006253446,0.0000217503,0.001308724,0.00004350634,0.002438884],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.001220295,"threshold_uncertainty_score":0.004082263,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04790400590763415,"score_gpt":0.292843732064181,"score_spread":0.2449397261565468,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}