{"id":"W2131826163","doi":"10.1128/iai.71.4.2142-2152.2003","title":"An<i>Escherichia coli</i>MG1655 Lipopolysaccharide Deep-Rough Core Mutant Grows and Survives in Mouse Cecal Mucus but Fails To Colonize the Mouse Large Intestine","year":2003,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Probiotics and Fermented Foods","field":"Agricultural and Biological Sciences","cited_by":94,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; University of Guelph; Rhode Island Agricultural Experiment Station; University of Oklahoma","keywords":"Biology; Microbiology; Mucus; Mutant; Escherichia coli; Agar; Cecum; Lipopolysaccharide; Agar plate; Kanamycin; Bacteria; Molecular biology; Biochemistry; Antibiotics; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001598278,0.0006996849,0.0004082147,0.0002380417,0.000138806,0.0003560446,0.000310458,0.0003643406,0.0007623229],"category_scores_gemma":[0.0001554714,0.0002626722,0.0004128058,0.000223929,0.0002649432,0.0001732477,0.0004782783,0.0005619172,0.0006766829],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003287936,"about_ca_system_score_gemma":0.0002593505,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001939655,"about_ca_topic_score_gemma":0.001964315,"domain_scores_codex":[0.9997706,0.00003147207,0.00003339387,0.00004227726,0.00007946789,0.00004282174],"domain_scores_gemma":[0.9996604,0.00003397208,0.0001323405,0.00003783023,0.00003183147,0.0001035793],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003256489,0.00001524209,0.0001781628,0.00001482158,0.000004283365,0.00004426882,0.000008098199,0.00002341868,0.9993513,0.00004673548,0.00002499066,0.0002561002],"study_design_scores_gemma":[0.00002500808,0.0006177258,0.017317,0.00001519218,0.00003245283,0.0008389305,0.0000956342,0.001411778,0.9751866,0.00005571206,0.004386318,0.00001766038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9929091,0.0003525215,0.003850871,0.0001262471,0.00004671991,0.00005593529,0.00120339,0.0001179121,0.001337326],"genre_scores_gemma":[0.9802704,0.0004005508,0.008868098,0.0001687832,0.0000123076,0.00006638523,0.003553188,0.0001312551,0.006529192],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001939655,"threshold_uncertainty_score":0.003856719,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02223683510711465,"score_gpt":0.2437301324097425,"score_spread":0.2214932973026278,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}