{"id":"W2132059141","doi":"10.1093/molbev/mst254","title":"Reduced Nuclear Genomes Maintain High Gene Transcription Levels","year":2013,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"Canadian Institutes of Health Research; Génome Québec","keywords":"Biology; Genome; Genetics; Gene; Nuclear gene; Transcription (linguistics); Regulation of gene expression; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009883885,0.0002158494,0.0002880743,0.0003519132,0.0002855716,0.0005589342,0.0002146817,0.0003105545,0.001109008],"category_scores_gemma":[0.0003613326,0.0001926333,0.0002503731,0.0003626494,0.0003523417,0.000358734,0.0004245795,0.0004155235,0.0005263973],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003482654,"about_ca_system_score_gemma":0.0002711626,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007801388,"about_ca_topic_score_gemma":0.00144546,"domain_scores_codex":[0.9997963,0.00001395219,0.000008923585,0.0001082991,0.00004531248,0.00002723076],"domain_scores_gemma":[0.9995533,0.00008489117,0.0001297558,0.00008107978,0.00008969819,0.00006122844],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00005170078,0.000005499215,0.00400414,0.00004109605,0.000008949487,0.00003398775,0.00007193129,0.00006112658,0.9927797,0.000164607,0.00002656059,0.002750662],"study_design_scores_gemma":[0.00002125859,0.0002848552,0.3312547,0.000037639,0.00008545532,0.001218301,0.0006391183,0.002488269,0.6484128,0.001357093,0.01416157,0.00003897507],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.991039,0.0009158254,0.005146976,0.00007537577,0.00001033209,0.000005688037,0.001004349,0.0001445152,0.001657962],"genre_scores_gemma":[0.9931399,0.0002517081,0.00320587,0.00005299938,0.000007830018,0.00001223023,0.002158775,0.0000408757,0.001129821],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001109008,"threshold_uncertainty_score":0.003709972,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006900768622988928,"score_gpt":0.2122181191367435,"score_spread":0.2053173505137546,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}