{"id":"W2132469519","doi":"10.1098/rspb.2011.1552","title":"Population genomics of parallel phenotypic evolution in stickleback across stream–lake ecological transitions","year":2011,"lang":"en","type":"article","venue":"Proceedings of the Royal Society B Biological Sciences","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":156,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; National Human Genome Research Institute; Howard Hughes Medical Institute","keywords":"Stickleback; Biology; Local adaptation; Population genomics; Ecology; Population; Watershed; Ecotype; Evolutionary biology; Genomics; Genome; Fishery; Genetics; Fish <Actinopterygii>; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003058296,0.000088309,0.0001318673,0.000008300411,0.0001647963,0.000008329383,0.0003318091,0.0002015075,0.00004457674],"category_scores_gemma":[0.00006255889,0.00005542434,0.0001498542,0.000180392,0.0005237122,0.000006539535,0.0001368982,0.00007289821,6.424194e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001443219,"about_ca_system_score_gemma":0.00001757651,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007676801,"about_ca_topic_score_gemma":0.00004549142,"domain_scores_codex":[0.9992411,0.00001476279,0.0002104327,0.0002300294,0.0001185319,0.0001851346],"domain_scores_gemma":[0.9996844,0.000007843097,0.000155679,0.00004769889,0.00007332506,0.00003108531],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000400915,0.0000844586,0.9805211,0.0000112601,0.00001091788,1.744617e-8,0.0005288552,0.0005744068,0.01634206,0.00165598,0.00004515174,0.0001856984],"study_design_scores_gemma":[0.0001813878,0.0002232058,0.9914556,0.000006742355,0.000007851098,5.888646e-7,0.001022538,0.0003495959,0.002911403,0.003728774,0.00003377323,0.00007852178],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987946,0.00005320151,0.0001592141,0.00005142978,0.00005360172,0.0001432172,0.0000326542,0.000005003501,0.0007070831],"genre_scores_gemma":[0.9958878,0.00002186039,0.003975314,0.00004280005,0.00002714862,0.000003309069,0.00001042069,0.000001684887,0.00002962684],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01343066,"threshold_uncertainty_score":0.2260139,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02778975782177955,"score_gpt":0.2438859483851425,"score_spread":0.216096190563363,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}