{"id":"W2132565683","doi":"10.3201/eid1711.110159","title":"Group A Streptococcus emm Gene Types in Pharyngeal Isolates, Ontario, Canada, 2002–2010","year":2011,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Hypervariable region; Pharyngitis; Streptococcus pyogenes; Biology; Streptococcus; Group A; Acute Pharyngitis; Molecular epidemiology; Pathogen; Microbiology; Epidemiology; Pharynx; Gene; Virology; Genetics; Medicine; Genotype; Bacteria; Internal medicine; Staphylococcus aureus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0000409798,0.0002801239,0.000352315,0.0002151258,0.0001529407,0.00001873103,0.00006934568,0.0000772184,0.007282502],"category_scores_gemma":[0.00004492261,0.0002564586,0.0001356065,0.0003349327,0.00004938436,0.0001323652,0.00004486662,0.0002324831,0.00007074626],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007423653,"about_ca_system_score_gemma":0.0006342904,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9516979,"about_ca_topic_score_gemma":0.9707291,"domain_scores_codex":[0.9986103,0.00003710396,0.000325303,0.0004140905,0.0001713537,0.0004418411],"domain_scores_gemma":[0.9991248,0.00003521849,0.000089399,0.0003613718,0.00007165592,0.0003175705],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008446888,0.001116603,0.9910055,0.00002730286,0.0002431777,0.0002824489,0.0002075979,0.00001425393,0.0001103669,0.00005379422,0.00419586,0.002658579],"study_design_scores_gemma":[0.002205943,0.0003741602,0.991166,0.00007854439,0.0002761006,0.00005414691,0.00003523566,0.00005241676,0.0003510676,0.000133278,0.005018364,0.0002547419],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9852729,0.000651341,0.00002718034,0.00003666749,0.0007322669,0.0006676131,0.00005061067,0.0001745358,0.01238691],"genre_scores_gemma":[0.9971654,0.00004052159,0.00006145748,0.0002076487,0.0001303949,0.0002480481,0.0000858909,0.00003723924,0.002023434],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01903117,"threshold_uncertainty_score":0.9999887,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01668239856948044,"score_gpt":0.2391059300857195,"score_spread":0.222423531516239,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}