{"id":"W2132671821","doi":"10.1126/science.1128796","title":"<i>Phytophthora</i> Genome Sequences Uncover Evolutionary Origins and Mechanisms of Pathogenesis","year":2006,"lang":"en","type":"article","venue":"Science","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":1079,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Phytophthora ramorum; Phytophthora; Biology; Phytophthora sojae; Genome; Gene; Genetics; Oomycete; Botany; Evolutionary biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002879006,0.00008662533,0.0001130414,0.00001818689,0.0002814904,0.00003260659,0.0002571663,0.00003615868,0.00003773146],"category_scores_gemma":[0.00001251527,0.0000326131,0.00003298645,0.0006430075,0.0004358685,0.00017851,0.00006159872,0.0000321304,0.000004308371],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000414471,"about_ca_system_score_gemma":0.00005167478,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001592619,"about_ca_topic_score_gemma":0.0001589332,"domain_scores_codex":[0.998962,0.00002018609,0.0001440117,0.0003036076,0.0003310124,0.0002391413],"domain_scores_gemma":[0.9996933,0.00004421797,0.00007700037,0.00004966316,0.00007371361,0.00006214649],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000004200871,0.00001905638,0.003144196,0.000003546549,6.442492e-7,0.000005913092,0.000002634094,0.0000192804,0.9877924,0.007988768,0.000007858727,0.001011477],"study_design_scores_gemma":[0.00004285846,0.00009144573,0.9130462,0.000014001,0.000005503642,0.00003355909,0.00006201877,0.00007443685,0.06279026,0.01629752,0.007383436,0.0001587535],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9975393,0.0006890795,0.00009479523,0.0001290215,0.00009004249,0.00007653454,0.000211308,0.0000212157,0.001148674],"genre_scores_gemma":[0.9984354,0.00005087846,0.001130559,0.00004787471,0.00006044106,0.000003422243,0.000009595451,3.650421e-7,0.0002614803],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9250022,"threshold_uncertainty_score":0.2165025,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008916229793744752,"score_gpt":0.189942779531435,"score_spread":0.1810265497376902,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}