{"id":"W2132716248","doi":"10.3835/plantgenome2010.09.0022","title":"Association Mapping of Biomass Yield and Stem Composition in a Tetraploid Alfalfa Breeding Population","year":2011,"lang":"en","type":"article","venue":"The Plant Genome","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":77,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Linkage disequilibrium; Population; Association mapping; Allele; Genetic marker; Plant breeding; Agronomy; Marker-assisted selection; Genetic association; Genetics; Single-nucleotide polymorphism; Genotype; Haplotype; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002131251,0.00005637987,0.00007951869,0.00004481638,0.00005239291,0.000007703553,0.00006484227,0.00006309053,0.000006243298],"category_scores_gemma":[0.000007163952,0.00004593476,0.0000204255,0.00004563207,0.00001156271,0.000002486571,0.00003987454,0.00003414671,0.000001153492],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000008220381,"about_ca_system_score_gemma":0.000004405767,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002826158,"about_ca_topic_score_gemma":0.00003867263,"domain_scores_codex":[0.9995897,0.00002145255,0.0001195218,0.0001036586,0.00006480454,0.0001008306],"domain_scores_gemma":[0.9998007,0.0000121001,0.00008831837,0.00006467319,0.00001594579,0.00001827819],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003355807,0.0000198064,0.1563475,0.00001999242,0.00002290423,9.861591e-7,0.0004997296,0.000006227263,0.8427509,0.00003987694,0.00005289387,0.000205685],"study_design_scores_gemma":[0.0003511399,0.0001892063,0.9503292,0.00005703401,0.00002846407,0.00002154136,0.0007312128,0.0001032813,0.04722979,0.0001341702,0.0006661533,0.0001587941],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987105,0.0002227432,0.000113855,0.00005835175,0.00004179075,0.00007557862,0.00007197914,0.000003982209,0.0007012686],"genre_scores_gemma":[0.9995615,0.0001172571,0.00008714045,0.00003220797,0.000031987,0.000001356818,0.0000824471,0.000002729281,0.00008333841],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7955211,"threshold_uncertainty_score":0.1873165,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04183406530635796,"score_gpt":0.1957215040658921,"score_spread":0.1538874387595341,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}