{"id":"W2132721442","doi":"10.1534/g3.114.012294","title":"Comparative Mapping Between Coho Salmon (<i>Oncorhynchus kisutch</i>) and Three Other Salmonids Suggests a Role for Chromosomal Rearrangements in the Retention of Duplicated Regions Following a Whole Genome Duplication Event","year":2014,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":66,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada","funders":"National Marine Fisheries Service; School of Aquatic and Fishery Sciences; National Oceanic and Atmospheric Administration; University of Washington","keywords":"Biology; Oncorhynchus; Gene duplication; Synteny; Salmo; Genome; Genetics; Lineage (genetic); Evolutionary biology; Chromosome; Chromosomal rearrangement; Segmental duplication; Genome evolution; Phylogenetic tree; Karyotype; Gene; Gene family; Fish <Actinopterygii>; Fishery","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006436372,0.000151016,0.0001098833,0.0007562998,0.0003413168,0.0001991438,0.0001468298,0.0001262888,0.001438696],"category_scores_gemma":[0.0001349324,0.0001050204,0.0001780004,0.0004686661,0.0002133938,0.000116262,0.000412336,0.0001478795,0.0001946763],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002817938,"about_ca_system_score_gemma":0.0003116701,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01065693,"about_ca_topic_score_gemma":0.02374844,"domain_scores_codex":[0.9999391,0.000002651818,0.000004534608,0.00002507945,0.00001334291,0.0000153305],"domain_scores_gemma":[0.9998339,0.00002084181,0.00005802476,0.000008599151,0.00002450698,0.00005402089],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000228917,0.00002753447,0.1351656,0.00009849945,0.00006279831,0.0002899746,0.0005306646,0.0001237106,0.8503276,0.0003104095,0.0001039207,0.01273034],"study_design_scores_gemma":[0.000007697565,0.0001093231,0.9832928,0.000008226226,0.00002871523,0.0003655621,0.0003346458,0.000247478,0.0141173,0.00009291062,0.001388164,0.00000717381],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985937,0.0001318071,0.0003278218,0.00001059337,0.000001746111,0.000004557509,0.0001654133,0.000007456405,0.0007568379],"genre_scores_gemma":[0.9971936,0.0001048211,0.0006597367,0.00002248798,0.000002050001,0.00001145722,0.001049426,0.000004957617,0.0009515059],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01065693,"threshold_uncertainty_score":0.02118981,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0394220092508121,"score_gpt":0.2608341550685674,"score_spread":0.2214121458177553,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}