{"id":"W2132826365","doi":"10.1139/w04-113","title":"Genome-wide comparison of phage M13-infected vs. uninfected<i>Escherichia coli</i>","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Escherichia coli; Gene; Bacteriophage; Transcription (linguistics); Genome; Microbiology; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001878499,0.0002613826,0.0003933496,0.000491574,0.0002016497,0.0003877588,0.000126553,0.0002849401,0.0008778747],"category_scores_gemma":[0.0002235736,0.0001460492,0.0002920913,0.0004570233,0.00014697,0.00007581151,0.0001627755,0.0002914548,0.0001597231],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002950871,"about_ca_system_score_gemma":0.0001749878,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001733132,"about_ca_topic_score_gemma":0.003126618,"domain_scores_codex":[0.9998397,0.00001852868,0.000007048001,0.00006279276,0.00003234434,0.00003968899],"domain_scores_gemma":[0.999819,0.00005899274,0.00003755755,0.000009415832,0.00003205845,0.00004308261],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002061143,0.00001439139,0.002230063,0.00003355408,0.00001594459,0.00002313184,0.00001506808,0.0000290606,0.9967226,0.00001716069,0.00002757938,0.0006652726],"study_design_scores_gemma":[0.00002456334,0.0005454976,0.6535637,0.00001577217,0.0001275999,0.0005037088,0.0001407327,0.001207461,0.3416777,0.00009039576,0.002084608,0.0000183478],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962101,0.0004155679,0.0009749674,0.00002310088,0.000006117564,0.00001164331,0.001888997,0.00003174182,0.0004377323],"genre_scores_gemma":[0.9821683,0.0003928506,0.004137398,0.0001090216,0.000009222916,0.00005003877,0.0115688,0.00002722424,0.001537181],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001733132,"threshold_uncertainty_score":0.003446102,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008914650278772434,"score_gpt":0.2252566367767172,"score_spread":0.2163419864979447,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}