{"id":"W2133034192","doi":"10.1128/jvi.75.15.6923-6932.2001","title":"Effects of DNA Structure and Homology Length on Vaccinia Virus Recombination","year":2001,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Biology; Rolling circle replication; Recombination; DNA; Exonuclease; FLP-FRT recombination; Recombinant DNA; In vitro recombination; Plasmid; Branch migration; Exonuclease III; Site-specific recombination; Molecular biology; Genetic recombination; Genetics; Gene; Recombinase; Holliday junction; DNA replication; Polymerase; Complementary DNA; Molecular cloning; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002806895,0.0001221144,0.0004098507,0.0003135233,0.0000619396,0.000003905993,0.0001855088,0.0003528885,0.0002912908],"category_scores_gemma":[0.0003511863,0.00009289065,0.00007484286,0.00008851242,0.0001778558,0.00007439659,0.0000497516,0.000569262,0.00002852857],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002562953,"about_ca_system_score_gemma":0.00005085147,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000222369,"about_ca_topic_score_gemma":0.00001996743,"domain_scores_codex":[0.9987342,0.0004461922,0.000361324,0.0001319696,0.00004533463,0.0002809739],"domain_scores_gemma":[0.9988412,0.0005590927,0.0003401535,0.0001140884,0.0001039055,0.00004159725],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002076126,0.0001800604,0.002363934,0.00002092216,0.000208568,0.000118141,0.0001369669,0.00000269289,0.9707516,0.0006735653,0.001241504,0.0222259],"study_design_scores_gemma":[0.005851749,0.008054718,0.2419129,0.00003407177,0.00008719972,0.003230907,0.00002366527,0.000003900224,0.7175126,0.004814569,0.01833601,0.00013772],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953697,0.002983152,0.00003519336,0.0006574902,0.0006015133,0.00009548121,0.000007878311,0.000005786688,0.0002437908],"genre_scores_gemma":[0.997948,0.001488355,0.00003051786,0.0002949908,0.00005634515,0.000001175045,0.000004316545,0.000009081055,0.0001672496],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.253239,"threshold_uncertainty_score":0.3787971,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006452623904563679,"score_gpt":0.2500594254103877,"score_spread":0.243606801505824,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}