{"id":"W2133148997","doi":"10.1101/gad.1998811","title":"Diverse protein kinase interactions identified by protein microarrays reveal novel connections between cellular processes","year":2011,"lang":"en","type":"article","venue":"Genes & Development","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institutes of Health","keywords":"Biology; Proteome; Kinase; DNA microarray; Computational biology; Proteomics; Cell biology; Protein–protein interaction; Protein Array Analysis; Immunoprecipitation; Genetics; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002773701,0.0003599023,0.0003479075,0.0007090123,0.000261918,0.0004510255,0.0001618948,0.0004086254,0.001210204],"category_scores_gemma":[0.0003531754,0.0002674854,0.0002450015,0.0007140617,0.0002289994,0.0006728063,0.0003312155,0.0004738105,0.0004826026],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002426473,"about_ca_system_score_gemma":0.0001055773,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000135858,"about_ca_topic_score_gemma":0.0003875227,"domain_scores_codex":[0.9996545,0.00004455051,0.00002099474,0.0001053451,0.0001172943,0.00005737182],"domain_scores_gemma":[0.9998056,0.00006570974,0.00006284058,0.00001502879,0.00001742951,0.00003345663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009907976,0.00001406647,0.003532924,0.00006358666,0.00003239145,0.00006092396,0.00002771928,0.0001402977,0.9922634,0.0001671787,0.00007091304,0.003527453],"study_design_scores_gemma":[0.00002899905,0.0002831125,0.2813293,0.00002960839,0.0001926138,0.001532607,0.0002606357,0.006590725,0.6987969,0.002211852,0.00869607,0.0000475522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9845076,0.00382482,0.008568686,0.0002142497,0.00002668694,0.00001660222,0.001085383,0.0001091643,0.001646845],"genre_scores_gemma":[0.9849391,0.001787388,0.01088139,0.0001611718,0.00002562461,0.00004010288,0.001161399,0.00001594892,0.0009879115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001210204,"threshold_uncertainty_score":0.004048586,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04156990262308903,"score_gpt":0.2617148885228407,"score_spread":0.2201449858997517,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}