{"id":"W2133211243","doi":"10.1128/jcm.01551-08","title":"Use of <i>Bordetella pertussis</i> BP3385 To Establish a Cutoff Value for an IS <i>481</i> -Targeted Real-Time PCR Assay","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Sinai Hospital; University of Toronto; Toronto Public Health","funders":"","keywords":"Bordetella pertussis; Cutoff; Whooping cough; Polymerase chain reaction; Virology; Biology; Microbiology; Real-time polymerase chain reaction; Bordetella; Bacteria; Genetics; Gene; Physics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002509281,0.001256194,0.001359135,0.001013314,0.0007835907,0.001619569,0.0009632587,0.001455743,0.003268476],"category_scores_gemma":[0.003739465,0.0007199919,0.0007560905,0.000899989,0.001055382,0.0008574696,0.000502292,0.002120972,0.0024581],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008821632,"about_ca_system_score_gemma":0.0008435199,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001639729,"about_ca_topic_score_gemma":0.002308538,"domain_scores_codex":[0.9965037,0.0008419261,0.0003239658,0.0009503621,0.0008193075,0.000560695],"domain_scores_gemma":[0.997352,0.001025214,0.0003260814,0.0003153044,0.0007934254,0.0001879977],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002774302,0.000125976,0.002185207,0.0001424235,0.00001389268,0.00005038681,0.0001297995,0.0001482733,0.9916281,0.0003162397,0.0002100662,0.004772138],"study_design_scores_gemma":[0.00002689835,0.0006493015,0.009501585,0.00005463599,0.0000652067,0.0003152683,0.000104102,0.001824396,0.9832895,0.0003045114,0.003843281,0.00002145268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7848191,0.00285586,0.1901216,0.0006503428,0.0006338951,0.0007884608,0.001489442,0.001620847,0.01702046],"genre_scores_gemma":[0.7945349,0.001074146,0.1931209,0.0006091848,0.00009621189,0.001283025,0.002933967,0.0003543891,0.005993261],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003268476,"threshold_uncertainty_score":0.0132705,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07719679309276041,"score_gpt":0.3459130672168508,"score_spread":0.2687162741240904,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}