{"id":"W2133362958","doi":"10.1002/pro.431","title":"The <i>Deinococcus radiodurans</i> Snf2 intein caught in the act: Detection of the Class 3 intein signature Block F branched intermediate","year":2010,"lang":"en","type":"article","venue":"Protein Science","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"University of Alberta","keywords":"Intein; Deinococcus radiodurans; dnaB helicase; splice; Protein splicing; RNA splicing; Biology; Genetics; Gene; RNA","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006153336,0.0001601336,0.00006745959,0.0002199211,0.000099001,0.0001641942,0.0001020225,0.0002223256,0.0005531244],"category_scores_gemma":[0.0001071408,0.00005569031,0.00009865674,0.0001352778,0.0001140987,0.00008669585,0.0001029419,0.0001917152,0.0002585839],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001430495,"about_ca_system_score_gemma":0.00008005296,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001080816,"about_ca_topic_score_gemma":0.001467473,"domain_scores_codex":[0.9999379,0.00000416446,0.00000226472,0.00001414358,0.00002328605,0.00001826957],"domain_scores_gemma":[0.9999341,0.00001245473,0.00002080374,0.000005710177,0.000009900921,0.00001703473],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002410652,0.000003875227,0.0008633164,0.000004109671,9.875879e-7,0.00004519942,0.000006292778,0.00001372805,0.9985008,0.00002947607,0.00001584677,0.0004922521],"study_design_scores_gemma":[0.000002426857,0.00005765308,0.04074853,0.00000209532,0.000004895089,0.001010704,0.00003054947,0.0009042168,0.9557355,0.00003938785,0.001460419,0.000003642001],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952642,0.0001691616,0.003058683,0.00002237613,0.000004244922,0.00001037372,0.0003466725,0.00004595341,0.00107831],"genre_scores_gemma":[0.9931463,0.0001216562,0.004363463,0.00003903998,0.0000026029,0.000008254317,0.0009873962,0.00002010737,0.001311182],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001080816,"threshold_uncertainty_score":0.002149045,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004289485433887523,"score_gpt":0.2182523446464827,"score_spread":0.2139628592125952,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}