{"id":"W2133384137","doi":"10.1128/jcm.42.11.5270-5276.2004","title":"Selective Discrimination of <i>Listeria monocytogenes</i> Epidemic Strains by a Mixed-Genome DNA Microarray Compared to Discrimination by Pulsed-Field Gel Electrophoresis, Ribotyping, and Multilocus Sequence Typing","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":94,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Canada","funders":"","keywords":"Biology; Ribotyping; Subtyping; Multilocus sequence typing; Pulsed-field gel electrophoresis; Genetics; Typing; Listeria monocytogenes; Serotype; DNA microarray; Microbiology; Genotype; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001063223,0.0003018733,0.0008023957,0.0001040018,0.00008637609,0.0000229442,0.0004550465,0.0004783051,0.000005711977],"category_scores_gemma":[0.0009340238,0.0002739477,0.0002464202,0.0001364514,0.0002741902,0.0000240104,0.000212981,0.0003290987,0.000001979802],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001142016,"about_ca_system_score_gemma":0.0002342599,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00005408217,"about_ca_topic_score_gemma":0.0001395386,"domain_scores_codex":[0.996818,0.0004465304,0.001728825,0.0005321907,0.00007459323,0.0003998461],"domain_scores_gemma":[0.9977486,0.0001517589,0.001190025,0.0003043399,0.0004024243,0.000202825],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001281424,0.0002086425,0.001311886,0.00004708996,0.0001895056,0.000002732966,0.0001470016,0.00006714797,0.9931133,0.00001673312,0.001481277,0.002133197],"study_design_scores_gemma":[0.002360699,0.002748513,0.005069769,0.00009916475,0.0001145003,0.0002205723,0.0001363094,0.000007520742,0.9814152,0.0001808733,0.0073089,0.0003380441],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9831983,0.002339007,0.01228504,0.0009967042,0.0005477549,0.0003288841,0.0002673063,0.000006294535,0.00003064412],"genre_scores_gemma":[0.9943681,0.001089572,0.002917484,0.001048516,0.0002262907,0.000008478116,0.0002733319,0.0000334279,0.0000348389],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01169823,"threshold_uncertainty_score":0.9999713,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07069371926021326,"score_gpt":0.3761335458199436,"score_spread":0.3054398265597303,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}