{"id":"W2133536047","doi":"10.1128/jcm.02437-07","title":"Characterization of <i>Clostridium difficile</i> Strains Isolated from Patients in Ontario, Canada, from 2004 to 2006","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":92,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Mount Sinai Hospital; Toronto Public Health; University of Guelph","funders":"","keywords":"Ribotyping; Clostridium difficile; Microbiology; Metronidazole; Outbreak; Clostridiaceae; Biology; Clostridium difficile toxin B; Enterotoxin; Pulsed-field gel electrophoresis; Diarrhea; Clostridium difficile toxin A; Pore-forming toxin; Toxin; Molecular epidemiology; Antibiotic resistance; Virology; Antibiotics; Medicine; Genotype; Microbial toxins; Gene; Internal medicine; Escherichia coli; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003392269,0.0002238078,0.001312635,0.0002025522,0.00003748812,0.000005389881,0.0002795838,0.0003691016,0.0008469979],"category_scores_gemma":[0.0007825922,0.0001880136,0.0002656346,0.0002867764,0.0001382932,0.00005590538,0.00008853226,0.001127925,0.00001733577],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005003493,"about_ca_system_score_gemma":0.003716863,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.682865,"about_ca_topic_score_gemma":0.7636993,"domain_scores_codex":[0.9962569,0.0002244002,0.002535027,0.0003288243,0.0002528237,0.0004020308],"domain_scores_gemma":[0.9973895,0.0004429568,0.0008299592,0.0002967847,0.0006625793,0.0003782179],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002332836,0.001139826,0.3025015,0.000006355144,0.0001508666,0.0001844502,0.0001240555,0.00001053757,0.6877449,3.698608e-7,0.005123959,0.0006803967],"study_design_scores_gemma":[0.005858125,0.001945,0.8324475,0.0001903733,0.00007832426,0.0000426695,0.00002941755,0.000008780032,0.1489633,0.000004460094,0.01025659,0.0001754244],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966693,0.00007329657,0.00003845407,0.0009534959,0.0008874628,0.0003130504,0.0009751217,0.000004914121,0.00008492876],"genre_scores_gemma":[0.9976955,0.0001364924,0.0001676656,0.0007625084,0.0003368882,0.00000161684,0.0006310454,0.00002212594,0.0002461255],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5387815,"threshold_uncertainty_score":0.9274033,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03410459856414238,"score_gpt":0.2984441600850853,"score_spread":0.264339561520943,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}