{"id":"W2133838139","doi":"10.1093/jxb/ern234","title":"Involvement of Pinus taeda MYB1 and MYB8 in phenylpropanoid metabolism and secondary cell wall biogenesis: a comparative in planta analysis","year":2008,"lang":"en","type":"article","venue":"Journal of Experimental Botany","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":197,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ministère des Ressources naturelles et des Forêts (Québec); Université Laval; University of Alberta; Natural Resources Canada; Canadian Forest Service; University of British Columbia","funders":"Genome Canada","keywords":"Phenylpropanoid; MYB; Lignin; Cell wall; Biology; Secondary cell wall; Botany; Microarray analysis techniques; Transcription factor; Gene; Ectopic expression; Arabidopsis; Secondary metabolism; Cell biology; Gene expression; Biochemistry; Biosynthesis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002023639,0.0001700524,0.0005684468,0.0003548633,0.00003252106,0.000009710329,0.0001343057,0.00008306705,0.00002586617],"category_scores_gemma":[0.000006863114,0.0001448249,0.0001360749,0.0002687828,0.0001012549,0.00001572993,0.0001095134,0.0001080267,3.729851e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000268035,"about_ca_system_score_gemma":0.00006547317,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001249073,"about_ca_topic_score_gemma":0.0001396791,"domain_scores_codex":[0.9987041,0.0001264737,0.0005855041,0.0002306528,0.0001932283,0.0001600429],"domain_scores_gemma":[0.9993328,0.00001540865,0.0003579776,0.0001383121,0.0000465829,0.0001089248],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003293756,0.0002947802,0.02086578,0.000005164237,0.0003187452,0.00007367138,0.001057678,0.00002263977,0.9765874,0.000001537968,0.0004060044,0.00003728348],"study_design_scores_gemma":[0.001644669,0.0002421514,0.0248042,0.00002191384,0.0001162537,0.00009533497,0.002138434,0.0001349739,0.9699237,0.00000312438,0.000724941,0.0001503006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9672924,0.03228476,0.00001769422,0.00002042849,0.00002989236,0.00008400057,0.00003597183,0.000001009454,0.0002338624],"genre_scores_gemma":[0.9965196,0.002453685,0.000805931,0.00009926133,0.00003007873,0.000004747938,0.00001619604,0.000007492147,0.00006299924],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02983107,"threshold_uncertainty_score":0.590579,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01663620233967807,"score_gpt":0.259004032063993,"score_spread":0.2423678297243149,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}