{"id":"W2133965413","doi":"10.1086/522006","title":"Prevalent Herpes Simplex Virus Type 2 Infection is Associated with Altered Vaginal Flora and an increased Susceptibility to Multiple Sexually Transmitted Infections","year":2007,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":131,"is_retracted":false,"has_abstract":true,"ca_institutions":"Mount Sinai Hospital; University of Manitoba; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; European Commission","keywords":"Bacterial vaginosis; Chlamydia trachomatis; Trichomonas vaginalis; Vaginal flora; Neisseria gonorrhoeae; Gonorrhea; Incidence (geometry); Medicine; Rate ratio; Chlamydia; Immunology; Syphilis; Herpes simplex virus; Sexually transmitted disease; Virology; Internal medicine; Biology; Confidence interval; Virus; Gynecology; Microbiology; Human immunodeficiency virus (HIV)","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001309203,0.000327949,0.0006318517,0.0003470158,0.0002650028,0.0004673421,0.0002420327,0.0003710455,0.003064926],"category_scores_gemma":[0.005006928,0.0002820873,0.0005911776,0.0004953045,0.000348634,0.0002360437,0.0003670685,0.0007526851,0.0001036533],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002019915,"about_ca_system_score_gemma":0.0003654233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008648142,"about_ca_topic_score_gemma":0.0009315081,"domain_scores_codex":[0.9992597,0.0003025285,0.00008129083,0.0001378527,0.0001358805,0.00008278371],"domain_scores_gemma":[0.9958292,0.001063352,0.002226391,0.0001916946,0.0001695889,0.0005196467],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.009159257,0.0006178484,0.9632313,0.0005479151,0.001452053,0.0002915961,0.00004797541,0.0001551971,0.002250696,0.00006800776,0.0003409282,0.0218372],"study_design_scores_gemma":[0.0005259227,0.002873476,0.9936086,0.00007797181,0.0006070277,0.001203579,0.00003960609,0.0002455761,0.000262709,0.0001177176,0.0004285208,0.000009369292],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9925293,0.006125651,0.0002303708,0.0001368529,0.00005052768,0.00006805718,0.0002122338,0.00001182248,0.0006351696],"genre_scores_gemma":[0.998082,0.001343902,0.0002163587,0.0000567281,0.00005022209,0.00002284293,0.0001083494,0.000001499552,0.0001180022],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003064926,"threshold_uncertainty_score":0.01025319,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01946608447134219,"score_gpt":0.3131567933989844,"score_spread":0.2936907089276423,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}