{"id":"W2134420054","doi":"10.1128/genomea.00909-14","title":"Draft Genome Sequence of Uncultivated <i>Firmicutes</i> ( <i>Peptococcaceae</i> SCADC) Single Cells Sorted from Methanogenic Alkane-Degrading Cultures","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":42,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Genome Alberta; Genome Canada","keywords":"Alkane; Biology; Whole genome sequencing; Firmicutes; Bacteria; Illumina dye sequencing; Gene; Genome; Microbiology; Genetics; Biochemistry; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005346875,0.001619356,0.001553964,0.001846507,0.001181661,0.001062091,0.0009202943,0.001090827,0.005455902],"category_scores_gemma":[0.001506601,0.0009349791,0.001687407,0.004509508,0.0003811558,0.0005917727,0.0006100586,0.002157312,0.004161871],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001012218,"about_ca_system_score_gemma":0.003179544,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009880257,"about_ca_topic_score_gemma":0.01030153,"domain_scores_codex":[0.99965,0.0000297012,0.0000366122,0.0001419181,0.00008756566,0.00005423243],"domain_scores_gemma":[0.9991853,0.0001807669,0.0001586175,0.00007588998,0.0002392985,0.0001600915],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002091754,0.0001484877,0.003618901,0.002484356,0.0002371061,0.0007414669,0.0006970643,0.001690302,0.9553495,0.0008443182,0.01141625,0.02068044],"study_design_scores_gemma":[0.001128612,0.001767269,0.2173126,0.001203031,0.003308227,0.002599462,0.001455856,0.01280916,0.3229698,0.003662725,0.4312011,0.0005821019],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.1932206,0.001952029,0.04419354,0.000575794,0.0005651721,0.0004749295,0.7510619,0.002893419,0.005062621],"genre_scores_gemma":[0.04380879,0.0009350326,0.0497492,0.0001363038,0.00004714159,0.0003743986,0.9008391,0.0007258609,0.003384125],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.009880257,"threshold_uncertainty_score":0.01964545,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01950371616056709,"score_gpt":0.2442458154911046,"score_spread":0.2247420993305375,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}