{"id":"W2134536769","doi":"10.1093/gbe/evv027","title":"Massive and Widespread Organelle Genomic Expansion in the Green Algal Genus Dunaliella","year":2015,"lang":"en","type":"letter","venue":"Genome Biology and Evolution","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; University of New Brunswick; Western University","funders":"Medical Research Council; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research; National Health Laboratory Service; National Aeronautics and Space Administration","keywords":"Biology; Plastid; Genome; Green algae; Mitochondrial DNA; Dunaliella; Evolutionary biology; Organelle; Lineage (genetic); Genetics; Gene; Algae; Chloroplast; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003150007,0.0002280477,0.0002140975,0.00006269178,0.0001480969,0.00001526621,0.0002411217,0.001070877,0.00001307958],"category_scores_gemma":[0.00002945096,0.0001845748,0.00004476652,0.00005904149,0.0002691006,0.000003587214,0.0002407923,0.0004588215,0.00002172712],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003995133,"about_ca_system_score_gemma":0.00009385992,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003499046,"about_ca_topic_score_gemma":0.00008652658,"domain_scores_codex":[0.9986962,0.0002932075,0.0001641496,0.0004808027,0.00006124262,0.0003044064],"domain_scores_gemma":[0.9995049,0.0000263306,0.0001020163,0.0002732096,0.00005047135,0.00004312096],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000635477,0.00008512934,0.1120754,0.0002909811,0.0003893859,0.000288892,0.001609157,0.00002044291,0.4343118,0.0003944815,0.4470247,0.002874112],"study_design_scores_gemma":[0.001179661,0.0008431599,0.1449702,0.00002446904,0.0001266682,0.0003226019,0.0002336709,0.00001978045,0.0004812917,0.00509411,0.8459882,0.0007161722],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.948368,0.01720137,0.0002047237,0.03261552,0.0003171412,0.0005207962,0.0003066149,0.000009970937,0.0004559376],"genre_scores_gemma":[0.9428304,0.001191698,0.00009184938,0.0499968,0.002147463,0.00003109509,0.002849339,0.00002424286,0.0008371049],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4338305,"threshold_uncertainty_score":0.8259585,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01254310544944212,"score_gpt":0.2176035030841664,"score_spread":0.2050603976347243,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}