{"id":"W2135363028","doi":"10.1186/1471-2164-7-295","title":"Simultaneous host and parasite expression profiling identifies tissue-specific transcriptional programs associated with susceptibility or resistance to experimental cerebral malaria","year":2006,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Malaria Research and Control","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto Rehabilitation Institute; University of Toronto","funders":"University of Toronto; Canadian Institutes of Health Research; Genome Canada; Ontario Genomics; Ontario Genomics Institute; University of Washington","keywords":"Biology; Parasite hosting; Gene expression profiling; Plasmodium berghei; Parasitemia; DNA microarray; Virulence; Gene; Microarray; Gene expression; Microarray analysis techniques; Immune system; Cerebral Malaria; Transcriptome; Malaria; Virology; Plasmodium falciparum; Immunology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001878579,0.0002119056,0.000292941,0.0003926737,0.0001102751,0.0003397393,0.0001219126,0.0002262166,0.001169921],"category_scores_gemma":[0.0002244305,0.0001597952,0.0002060601,0.0002865329,0.0002159729,0.0001412676,0.0001867916,0.0004196487,0.0002342624],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001867526,"about_ca_system_score_gemma":0.0001339531,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001833624,"about_ca_topic_score_gemma":0.0004869114,"domain_scores_codex":[0.9997522,0.00002084285,0.00001329797,0.00009722706,0.00005752037,0.00005875171],"domain_scores_gemma":[0.9997782,0.00005710738,0.00007904581,0.00001777416,0.00002922852,0.00003865516],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002311634,0.00001958864,0.001955175,0.00002118908,0.000006369219,0.00001048017,0.00001339767,0.00003768449,0.9967727,0.0000171653,0.00002694099,0.0008881324],"study_design_scores_gemma":[0.00002426394,0.0009921112,0.202333,0.0000110759,0.00009417898,0.0004085665,0.0001295576,0.002197976,0.7919957,0.0001062789,0.001689508,0.0000176485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946484,0.000484595,0.002840437,0.00005140559,0.00001180649,0.00002711479,0.001257703,0.00006067616,0.0006178041],"genre_scores_gemma":[0.989749,0.000590524,0.005534136,0.00008695539,0.00002550384,0.0001819298,0.002279757,0.00003613078,0.001516063],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001169921,"threshold_uncertainty_score":0.00391376,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02502786893318096,"score_gpt":0.2778402533744744,"score_spread":0.2528123844412934,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}