{"id":"W2136000113","doi":"10.1128/mmbr.00003-07","title":"Regulation of Vacuolar pH and Its Modulation by Some Microbial Species","year":2007,"lang":"en","type":"review","venue":"Microbiology and Molecular Biology Reviews","topic":"Galectins and Cancer Biology","field":"Immunology and Microbiology","cited_by":151,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Foundation","keywords":"Biology; Phagosome; Effector; Pathogen; Microbiology; Immune system; Endocytic cycle; Organism; Mycobacterium tuberculosis; Symbiosis; Bacteria; Host (biology); Cell biology; Tuberculosis; Endocytosis; Cell; Ecology; Biochemistry; Immunology; Genetics; Phagocytosis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001046954,0.000866167,0.003554504,0.0003821017,0.0001971768,0.00001029033,0.0003634657,0.002758453,0.000209826],"category_scores_gemma":[0.0001246312,0.0006735648,0.0005038448,0.0002495146,0.0009481437,0.00006273933,0.0003093945,0.0007836553,0.0001049813],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005662328,"about_ca_system_score_gemma":0.0001002517,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001386581,"about_ca_topic_score_gemma":0.000009161948,"domain_scores_codex":[0.9949231,0.001600261,0.001598672,0.001159642,0.00001507356,0.000703281],"domain_scores_gemma":[0.9979585,0.0001985733,0.001214729,0.0004729093,0.0000993944,0.00005585176],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003269332,0.00005026134,0.00001891782,0.00230372,0.0003703215,0.000001701823,0.00002476152,2.148541e-8,0.7141411,0.001873661,0.001835029,0.2793478],"study_design_scores_gemma":[0.0006009389,0.0003382486,0.00001678376,0.001207797,0.0006808343,0.0006636332,0.000004301997,1.468041e-7,0.01612869,0.0001393199,0.9796374,0.0005818403],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.002466577,0.994115,0.0003039712,0.00004108501,0.0007829503,0.001520958,0.0006332809,0.00003827636,0.0000978906],"genre_scores_gemma":[0.001185973,0.9923206,0.0001274092,0.0002456507,0.00008006327,0.00008379627,0.004897871,0.00005285002,0.001005767],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9778025,"threshold_uncertainty_score":0.9995716,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03075086702224853,"score_gpt":0.3051027798907081,"score_spread":0.2743519128684595,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}