{"id":"W2136415990","doi":"10.1371/journal.pone.0040409","title":"Avian Resistance to Campylobacter jejuni Colonization Is Associated with an Intestinal Immunogene Expression Signature Identified by mRNA Sequencing","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"Science Foundation Ireland; Food Institutional Research Measure; University of Saskatchewan","keywords":"Biology; Campylobacter jejuni; Immune system; Colonization; Campylobacter; Microbiology; Population; Innate immune system; Immunology; Genetics; Bacteria; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000746216,0.0001696806,0.0001679749,0.0003125038,0.0001453968,0.000229728,0.00006261059,0.0002275329,0.0007575921],"category_scores_gemma":[0.0001545821,0.0001399544,0.0001834885,0.000182315,0.0001938287,0.00006084275,0.0001099167,0.0002188369,0.000231393],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001265328,"about_ca_system_score_gemma":0.00007389957,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000870793,"about_ca_topic_score_gemma":0.001373791,"domain_scores_codex":[0.9999202,0.000005357464,0.000005089595,0.00003118888,0.00001862133,0.00001951704],"domain_scores_gemma":[0.9997893,0.00004056507,0.00008477618,0.00001358389,0.00003306066,0.00003887386],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001044415,0.000008105734,0.004466847,0.00001836612,0.000005591679,0.00004929736,0.00003908291,0.00001970393,0.9945521,0.000008500742,0.00002256191,0.0007054733],"study_design_scores_gemma":[0.000007841159,0.0006277192,0.8830431,0.00001556809,0.00004390832,0.0008617128,0.0002409193,0.0007940348,0.1130325,0.00004545363,0.001277178,0.00001014172],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982396,0.0002596491,0.0005123728,0.00002193544,0.000004648542,0.000008792758,0.0005830133,0.00001397366,0.0003559719],"genre_scores_gemma":[0.9946819,0.0002930893,0.001636609,0.0000714666,0.000007156274,0.00002869723,0.001597547,0.00001495151,0.001668622],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000870793,"threshold_uncertainty_score":0.002534449,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04595845309981321,"score_gpt":0.227127886543763,"score_spread":0.1811694334439498,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}