{"id":"W2136546138","doi":"10.1128/genomea.00240-15","title":"Draft Genome Sequences for Canadian Isolates of Pectobacterium carotovorum subsp. brasiliense with Weak Virulence on Potato","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","funders":"","keywords":"Pectobacterium carotovorum; Biology; Virulence; Pectobacterium; Blackleg; Genome; Whole genome sequencing; Subtropics; Adaptation (eye); Botany; Microbiology; Genetics; Bacteria; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003496797,0.001011003,0.0006470858,0.0024158,0.001236779,0.0008648389,0.0006490481,0.0004950275,0.003060638],"category_scores_gemma":[0.001322828,0.0003493555,0.0008574598,0.004320005,0.0002451882,0.0003414117,0.0005236484,0.001129051,0.001258141],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002486249,"about_ca_system_score_gemma":0.00771879,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.241747,"about_ca_topic_score_gemma":0.3541455,"domain_scores_codex":[0.9997442,0.00001451298,0.00002633009,0.00006224945,0.00008689729,0.00006578854],"domain_scores_gemma":[0.9990758,0.000105308,0.0001561885,0.00006018785,0.00044498,0.0001576787],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002335871,0.0002301538,0.01970953,0.002096348,0.000168195,0.001591429,0.002039264,0.001213002,0.9068184,0.0009278993,0.01083361,0.05203629],"study_design_scores_gemma":[0.0003458192,0.0006983511,0.5993807,0.0006274838,0.001672911,0.00277933,0.004272809,0.004184921,0.123633,0.0009654508,0.2611836,0.0002557146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5145825,0.005099469,0.01485904,0.001073188,0.0002614935,0.0008197497,0.4523275,0.001110653,0.009866442],"genre_scores_gemma":[0.2051358,0.003760857,0.0381538,0.0002194914,0.00004880194,0.0003211737,0.745393,0.0002639759,0.006703001],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.758253,"threshold_uncertainty_score":0.4806798,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0335128712687958,"score_gpt":0.2197258209718423,"score_spread":0.1862129497030465,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}