{"id":"W2136546138","doi":"10.1128/genomea.00240-15","title":"Draft Genome Sequences for Canadian Isolates of Pectobacterium carotovorum subsp. brasiliense with Weak Virulence on Potato","year":2015,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Canadian Food Inspection Agency","funders":"","keywords":"Pectobacterium carotovorum; Biology; Virulence; Pectobacterium; Blackleg; Genome; Whole genome sequencing; Subtropics; Adaptation (eye); Botany; Microbiology; Genetics; Bacteria; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002774672,0.0002603738,0.0003248357,0.00003986714,0.0002566125,0.00005655938,0.0003956463,0.0000767019,0.00006410639],"category_scores_gemma":[0.00003492333,0.0001120365,0.00006607536,0.0002892012,0.0001278937,0.0001659285,0.00006155107,0.00007336503,0.00005010454],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001627338,"about_ca_system_score_gemma":0.0001265348,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.0144606,"about_ca_topic_score_gemma":0.08644787,"domain_scores_codex":[0.9982886,0.00004861073,0.0002930442,0.0004477837,0.000265086,0.0006568147],"domain_scores_gemma":[0.9990792,0.00006302333,0.0001706421,0.0001166557,0.0002557166,0.0003147782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002492835,0.00006511903,0.02724486,0.00001660206,0.00008162762,0.000009696902,0.0006263399,0.00002017172,0.9710724,0.00003790819,0.0001768239,0.0003992223],"study_design_scores_gemma":[0.001262146,0.006007173,0.7712066,0.0001152172,0.00009185393,0.00005824218,0.004138311,0.00002318102,0.006476136,0.0002300933,0.2092708,0.001120267],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9931533,0.0002339825,0.000002760931,0.0005747776,0.0001543953,0.0007511281,0.003943653,0.00003179646,0.001154172],"genre_scores_gemma":[0.998215,0.00006109907,0.0001522365,0.0003046055,0.0001273373,0.0001159217,0.0006357451,0.000002865953,0.0003851796],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9645962,"threshold_uncertainty_score":0.9921022,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0335128712687958,"score_gpt":0.2197258209718423,"score_spread":0.1862129497030465,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}