{"id":"W2136573248","doi":"10.3389/fmicb.2012.00279","title":"Internal RNA Replication Elements are Prevalent in Tombusviridae","year":2012,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":true,"ca_institutions":"York University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Replication (statistics); Biology; Virology; RNA; Computational biology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006112723,0.00009405417,0.0001766068,0.00004380794,0.00006031627,0.000007331653,0.0002899806,0.00006298919,0.0002846355],"category_scores_gemma":[0.0001051275,0.00004215724,0.00003325211,0.0002009961,0.00006032506,0.0000841853,0.0002080112,0.0001907038,0.00002442865],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001739177,"about_ca_system_score_gemma":0.000003357773,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001464283,"about_ca_topic_score_gemma":0.0003978852,"domain_scores_codex":[0.9987895,0.0002129321,0.0002335671,0.0002542585,0.00005314146,0.0004566301],"domain_scores_gemma":[0.9997287,0.0000561881,0.00009045503,0.00006945726,0.00001345121,0.000041735],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004169058,0.00008865188,0.5475346,0.000003135928,0.000008299656,0.00000193202,0.0000690185,9.239886e-7,0.4148839,0.000004534816,0.02616529,0.01119795],"study_design_scores_gemma":[0.000228793,0.00008436289,0.8045125,0.00001859403,0.000002367828,0.000009410704,0.0005476623,0.00001408559,0.009735407,0.00007618141,0.1846293,0.0001412782],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964819,0.001782415,0.000006704457,0.0005149765,0.0004140412,0.0002425451,0.0002047428,0.00001440605,0.0003382721],"genre_scores_gemma":[0.9982023,0.0005611001,0.000327379,0.0002189967,0.00009569572,0.00007198468,0.0001711809,7.429394e-7,0.0003505807],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4051485,"threshold_uncertainty_score":0.311656,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02572778572053937,"score_gpt":0.2671838382418749,"score_spread":0.2414560525213356,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}