{"id":"W2136575826","doi":"10.4269/ajtmh.13-0106","title":"Application of a qPCR Assay with Melting Curve Analysis for Detection and Differentiation of Protozoan Oocysts in Human Fecal Samples from Dominican Republic","year":2013,"lang":"en","type":"article","venue":"American Journal of Tropical Medicine and Hygiene","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Cryptosporidium; Cyclospora cayetanensis; Cyclospora; Feces; Biology; Cryptosporidium parvum; Coccidia; Microbiology; Polymerase chain reaction; Amplicon; Melting curve analysis; Virology; Apicomplexa; Veterinary medicine; Nested polymerase chain reaction; Parasite hosting; Gene; Protozoal disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00119146,0.0007239173,0.0004791671,0.00154101,0.0005183633,0.0004887878,0.0003624083,0.0003885277,0.00119063],"category_scores_gemma":[0.001214998,0.0005028299,0.0004571654,0.001008303,0.0004292782,0.0001839592,0.0003192623,0.0004069459,0.0003920476],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006687348,"about_ca_system_score_gemma":0.0009136426,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005134399,"about_ca_topic_score_gemma":0.01037203,"domain_scores_codex":[0.9986483,0.0002463972,0.0000911669,0.0004120565,0.0004814893,0.0001206396],"domain_scores_gemma":[0.9994649,0.0001467512,0.000101781,0.00004555662,0.0002185942,0.00002235013],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001737308,0.00007248562,0.01923207,0.0002102444,0.00002648087,0.0000872189,0.0002870495,0.000464139,0.9638018,0.0001977415,0.0002615491,0.01518553],"study_design_scores_gemma":[0.00004556537,0.0008020576,0.115378,0.0001438337,0.0001452993,0.0007293199,0.0004407356,0.01152345,0.8543265,0.0002756035,0.01612916,0.00006048781],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8618977,0.002280504,0.1231317,0.0003256254,0.00007955611,0.001021385,0.004599731,0.001040731,0.005623063],"genre_scores_gemma":[0.7888524,0.001871406,0.1915269,0.0002269975,0.00004278697,0.002200615,0.006422682,0.0001140488,0.008742193],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005134399,"threshold_uncertainty_score":0.01020902,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01375708857180714,"score_gpt":0.2797193383845157,"score_spread":0.2659622498127086,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}