{"id":"W2136575826","doi":"10.4269/ajtmh.13-0106","title":"Application of a qPCR Assay with Melting Curve Analysis for Detection and Differentiation of Protozoan Oocysts in Human Fecal Samples from Dominican Republic","year":2013,"lang":"en","type":"article","venue":"American Journal of Tropical Medicine and Hygiene","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Cryptosporidium; Cyclospora cayetanensis; Cyclospora; Feces; Biology; Cryptosporidium parvum; Coccidia; Microbiology; Polymerase chain reaction; Amplicon; Melting curve analysis; Virology; Apicomplexa; Veterinary medicine; Nested polymerase chain reaction; Parasite hosting; Gene; Protozoal disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001840277,0.00007657079,0.0005030656,0.0002891145,0.00004504101,0.000004183296,0.00004456155,0.00004590023,0.0000174574],"category_scores_gemma":[0.0004061702,0.00005062511,0.00004573448,0.0002623325,0.0003956415,0.00005930561,0.00001135967,0.0001153742,8.113779e-8],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001570921,"about_ca_system_score_gemma":0.00001527952,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002431624,"about_ca_topic_score_gemma":0.0003120272,"domain_scores_codex":[0.9991265,0.0001261146,0.0004903674,0.0001140376,0.00004453416,0.00009844778],"domain_scores_gemma":[0.9983765,0.0006935711,0.0006328817,0.00008601321,0.0001807011,0.00003029045],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002238662,0.000129381,0.7863346,0.00001773592,0.0004055296,3.434908e-7,0.0003416802,0.000009661869,0.1367012,0.0002098051,0.000005331723,0.07562082],"study_design_scores_gemma":[0.001758015,0.002503483,0.9858554,0.00006600822,0.0003985837,0.00001442685,0.0006631636,0.0001636164,0.008221244,0.0002788883,0.00002647734,0.00005068162],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.93205,0.0001421976,0.06733806,0.0001967641,0.00002229796,0.0002344056,0.000006748191,0.000002397575,0.000007160449],"genre_scores_gemma":[0.9989297,0.00003198914,0.0009258533,0.00002043227,0.00003766521,0.00003384157,0.0000150625,0.000003905572,0.000001512076],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1995208,"threshold_uncertainty_score":0.3675905,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01375708857180714,"score_gpt":0.2797193383845157,"score_spread":0.2659622498127086,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}