{"id":"W2136657231","doi":"10.1007/s12250-007-0001-8","title":"Phylogenetic analysis of Orgyia pseudotsugata single-nucleocapsid nucleopolyhedrovirus","year":2007,"lang":"en","type":"article","venue":"Virologica Sinica","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"Natural Resources Canada; Canadian Forest Service","funders":"Zhejiang University","keywords":"Polyhedrin; Phylogenetic tree; Biology; Virology; Gene; Primer (cosmetics); Baculoviridae; Lepidoptera genitalia; Polymerase chain reaction; Genetics; Phylogenetics; Accession number (library science); Botany; GenBank; Spodoptera","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001899745,0.0002270154,0.0003669157,0.001519966,0.0007614368,0.0005698623,0.0002030075,0.0002758842,0.0006832198],"category_scores_gemma":[0.0003094451,0.0001456426,0.0003754405,0.0009520107,0.0002288545,0.0003187942,0.0003508476,0.0005182538,0.0003613652],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003455344,"about_ca_system_score_gemma":0.0003223787,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001393544,"about_ca_topic_score_gemma":0.001967556,"domain_scores_codex":[0.9998571,0.00001761271,0.00001391,0.00005156255,0.00002414361,0.00003558557],"domain_scores_gemma":[0.9995523,0.0001006072,0.0001146687,0.00003266999,0.00007814168,0.0001215939],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000795344,0.00009794577,0.05745082,0.0002498417,0.00008694131,0.0005173441,0.0007499886,0.0005220933,0.9227148,0.0006917751,0.0001557967,0.01596731],"study_design_scores_gemma":[0.0000545246,0.000699442,0.8856727,0.00009495585,0.0003807641,0.003410154,0.001934899,0.008327626,0.07618947,0.0007797275,0.02239882,0.00005690598],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9960065,0.0005812788,0.001670878,0.00002591633,0.00001254979,0.00002056607,0.0004400264,0.00001793168,0.001224267],"genre_scores_gemma":[0.9940118,0.0003440722,0.00283529,0.00004606801,0.00001346547,0.00002231948,0.001980592,0.00001724637,0.0007291039],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001519966,"threshold_uncertainty_score":0.002770901,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01659859534437728,"score_gpt":0.2785393550352428,"score_spread":0.2619407596908655,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}