{"id":"W2136873859","doi":"10.1111/nph.12994","title":"Distinct subclades of <scp><i>Aux/IAA</i></scp> genes are direct targets of <scp>ARF</scp>5/<scp>MP</scp> transcriptional regulation","year":2014,"lang":"en","type":"article","venue":"New Phytologist","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":63,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Auxin; Gene; Repressor; Chromatin immunoprecipitation; Biology; Signal transduction; Trans-acting; Cell biology; Gene expression; Regulation of gene expression; Transcription factor; Genetics; Transcriptional regulation; Transgene; Gene family; Mutant; Promoter","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009446441,0.0004299939,0.0001561758,0.0004024805,0.0001925309,0.0002775317,0.0002198729,0.0001802262,0.001361866],"category_scores_gemma":[0.0001870961,0.0002627797,0.0004577647,0.0002231226,0.0002382153,0.0001134703,0.000370331,0.0007908967,0.0008960932],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003930882,"about_ca_system_score_gemma":0.000250634,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007427138,"about_ca_topic_score_gemma":0.001144323,"domain_scores_codex":[0.9998037,0.00002022255,0.00001946863,0.00005545513,0.00005967857,0.00004144744],"domain_scores_gemma":[0.9997657,0.00004937685,0.00007456337,0.00004017895,0.00002114304,0.00004910289],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002828344,0.000007226256,0.0002071392,0.000009930211,0.000002498793,0.00003057294,0.00001248258,0.00002343382,0.9987526,0.00007728012,0.00001925222,0.0008293142],"study_design_scores_gemma":[0.00001013803,0.000101494,0.02046635,0.0000066758,0.00002926794,0.0007090025,0.00004485891,0.0007593338,0.973325,0.00007745663,0.0044619,0.0000085856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.987106,0.000561973,0.008169569,0.00008382076,0.00003181653,0.00005850366,0.001061198,0.0003852847,0.002541965],"genre_scores_gemma":[0.98364,0.0003417542,0.006095885,0.00008408471,0.00001701944,0.00007918449,0.004927913,0.0002279534,0.004586271],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001361866,"threshold_uncertainty_score":0.004555941,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0294153284223671,"score_gpt":0.2477526175054634,"score_spread":0.2183372890830963,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}