{"id":"W2137074020","doi":"10.1093/infdis/jit622","title":"N-Glycolylated Peptidoglycan Contributes to the Immunogenicity but Not Pathogenicity of Mycobacterium tuberculosis","year":2013,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Muramyl dipeptide; Immunogenicity; Mycobacterium tuberculosis; Microbiology; Mycolic acid; Peptidoglycan; Biology; Ex vivo; Tuberculosis; Mycobacterium; In vivo; Tumor necrosis factor alpha; Immunology; Immune system; Bacteria; Gene; Medicine; Biochemistry; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001033386,0.0002101181,0.0007110827,0.000152934,0.0001943651,0.0000314541,0.0003805475,0.00009729503,0.000389731],"category_scores_gemma":[0.004142487,0.0001024925,0.0004775983,0.0004390909,0.000258378,0.0001331312,0.0001511884,0.0004750496,0.00008345997],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001339054,"about_ca_system_score_gemma":0.0002443336,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001554146,"about_ca_topic_score_gemma":0.00006224988,"domain_scores_codex":[0.9974118,0.0007234805,0.0008531451,0.0001371281,0.0004202186,0.000454184],"domain_scores_gemma":[0.9963309,0.001115273,0.0004521047,0.0004451919,0.001202527,0.0004539903],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.005178626,0.0008852211,0.4477829,0.0001816348,0.002835451,0.00002827688,0.0006577165,0.0008036447,0.4879923,0.00005562394,0.04900347,0.004595193],"study_design_scores_gemma":[0.002014687,0.001972151,0.9727424,0.0001263486,0.0009860937,0.0003988906,0.0003525005,0.0002192559,0.01962328,0.0001659881,0.00126084,0.0001375282],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9776387,0.002129951,0.0001826357,0.01889632,0.0001817298,0.0007338548,0.00009184099,0.00002493828,0.0001201019],"genre_scores_gemma":[0.9927755,0.001107293,0.00001481805,0.005662384,0.0003459,0.00002452308,0.000005942198,0.00002116712,0.00004245469],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5249596,"threshold_uncertainty_score":0.4959244,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01146499520974281,"score_gpt":0.2708377429400641,"score_spread":0.2593727477303213,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}