{"id":"W2138035164","doi":"10.1128/iai.01662-06","title":"Surface Expression of Toll-Like Receptor 9 Is Upregulated on Intestinal Epithelial Cells in Response to Pathogenic Bacterial DNA","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":149,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; University of Alberta","funders":"Fondation pour la Recherche Médicale; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"Biology; Salmonella enterica; Microbiology; Secretion; TLR9; Toll-Like Receptor 9; Molecular biology; Gene expression; Salmonella; Gene; Bacteria; DNA methylation","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009648634,0.0002587186,0.0003318049,0.0003161366,0.0001509851,0.0003129919,0.0001154785,0.0003819306,0.00162545],"category_scores_gemma":[0.0001384085,0.0001971948,0.0003905845,0.0001831859,0.0002133124,0.0002342709,0.0002090489,0.000600351,0.0005814584],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001943425,"about_ca_system_score_gemma":0.00009015436,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002230358,"about_ca_topic_score_gemma":0.0002275019,"domain_scores_codex":[0.9997577,0.00003699643,0.00002183324,0.00005293564,0.00006116468,0.00006936461],"domain_scores_gemma":[0.9998203,0.00002228982,0.00005237711,0.00001963415,0.00002996069,0.00005562826],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008881799,0.000006000537,0.0002314351,0.00001744624,0.00000161938,0.00005446729,0.000007422086,0.000005599103,0.9993908,0.000004994304,0.000006885452,0.0001843654],"study_design_scores_gemma":[0.00002499916,0.0006960326,0.08226563,0.00002013858,0.00003411226,0.0008605748,0.0002484708,0.000580041,0.9136077,0.00005677892,0.00159147,0.0000139839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956439,0.001289685,0.001394487,0.0001020968,0.00002953115,0.00001725014,0.000540468,0.00004689499,0.0009356119],"genre_scores_gemma":[0.9945827,0.0009166181,0.001661382,0.00009097274,0.00001646103,0.00003875053,0.0007992641,0.00001404995,0.00187966],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00162545,"threshold_uncertainty_score":0.005437672,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01060407558607801,"score_gpt":0.2451258648460377,"score_spread":0.2345217892599597,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}