{"id":"W2138329279","doi":"10.1128/genomea.01066-13","title":"Complete Genome Sequence of <i>Bacteroidales</i> Strain CF from a Chloroform-Dechlorinating Enrichment Culture","year":2013,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Chloroform; Whole genome sequencing; Strain (injury); Biology; Organism; Metagenomics; Enrichment culture; Genome; Microbiology; Gene; Bacteria; Genetics; Chromatography; Chemistry; Anatomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001961409,0.0002525299,0.0002553059,0.00003584734,0.0001342918,0.00006080493,0.0004857619,0.000093286,0.00946079],"category_scores_gemma":[0.00001443032,0.0002171186,0.00007627296,0.0002652228,0.0001534467,0.0003912979,0.0002974107,0.0001362703,0.002593941],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002911825,"about_ca_system_score_gemma":0.00001805522,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001009044,"about_ca_topic_score_gemma":0.0000825229,"domain_scores_codex":[0.997978,0.00004061782,0.0005100546,0.0004541418,0.0005444172,0.0004727341],"domain_scores_gemma":[0.9991365,0.00001372369,0.0003027568,0.0003366655,0.00004487192,0.0001654776],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000008304951,0.00008852964,0.01355845,0.00000954816,0.00002842713,0.000002207754,0.00124507,0.00003240309,0.9833552,0.00000632804,0.0004495172,0.001216015],"study_design_scores_gemma":[0.002291042,0.0005400851,0.5983025,0.00005812967,0.00005263347,0.000007045001,0.001374298,0.0002401984,0.01912699,0.0007480306,0.3760265,0.001232532],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9913993,0.00006100436,0.0001217854,0.0001399696,0.0002103485,0.0006392421,0.003541525,0.00003888399,0.00384795],"genre_scores_gemma":[0.9940845,0.0001062481,0.00202327,0.0008992159,0.00007340226,0.00002511732,0.001623854,0.00001576921,0.001148612],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9642282,"threshold_uncertainty_score":0.9981827,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02211203489610673,"score_gpt":0.2237963278381746,"score_spread":0.2016842929420679,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}