{"id":"W2139050348","doi":"10.1128/aac.03320-14","title":"Genotypic and Phenotypic Profiles of Escherichia coli Isolates Belonging to Clinical Sequence Type 131 (ST131), Clinical Non-ST131, and Fecal Non-ST131 Lineages from India","year":2014,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Universiti Malaya; Academy of Scientific and Innovative Research; Dalhousie University; Deutsche Forschungsgemeinschaft","keywords":"Multilocus sequence typing; Escherichia coli; Biology; Microbiology; Virulence; Antibiotic resistance; Genotype; Typing; Phylogenetic tree; Feces; Multiple drug resistance; Molecular epidemiology; Drug resistance; Antibiotics; Gene; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001345153,0.0001725763,0.0002022451,0.0006995805,0.0002065839,0.0003527756,0.0001561971,0.0002114601,0.0005052068],"category_scores_gemma":[0.0006760731,0.0001277332,0.0002139593,0.001016843,0.0002350264,0.0001307698,0.0002223911,0.0001970886,0.0001634064],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001444746,"about_ca_system_score_gemma":0.0002789207,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005459474,"about_ca_topic_score_gemma":0.007391495,"domain_scores_codex":[0.9996777,0.00004478541,0.00005738092,0.00007063347,0.00008562004,0.00006391764],"domain_scores_gemma":[0.9994581,0.0001248864,0.0001340129,0.00004091515,0.0001388865,0.0001030964],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008243718,0.0002881562,0.7717513,0.0001887808,0.00007337602,0.001446482,0.001417283,0.0004475974,0.2129317,0.0001077804,0.0003040852,0.01021907],"study_design_scores_gemma":[0.0000058651,0.0003285999,0.9892074,0.00000735381,0.00003479485,0.001461937,0.0009155658,0.0001719044,0.007240038,0.00002019383,0.0005971392,0.000009218731],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991091,0.00004622986,0.00006652099,0.00001261567,0.000002349634,0.00001246773,0.0004183803,0.000001936363,0.0003304279],"genre_scores_gemma":[0.9977564,0.0001364545,0.00035181,0.00003095129,0.000005800021,0.00001377142,0.001268703,0.000002415933,0.0004336044],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005459474,"threshold_uncertainty_score":0.01085544,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01649510086997545,"score_gpt":0.3035164376884004,"score_spread":0.287021336818425,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}