{"id":"W2139547389","doi":"10.1093/cid/ciu366","title":"Outbreak of Invasive Streptococcus pneumoniae Serotype 12F Among a Marginalized Inner-City Population in Winnipeg, Canada, 2009-2011","year":2014,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Pneumonia and Respiratory Infections","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Toronto; University of Manitoba; University of Calgary; Winnipeg Regional Health Authority","funders":"","keywords":"Serotype; Multiple Loci VNTR Analysis; Medicine; Outbreak; Streptococcus pneumoniae; Multilocus sequence typing; Pulsed-field gel electrophoresis; Population; Variable number tandem repeat; Microbiology; Virology; Environmental health; Antibiotics; Biology; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004352062,0.0005958998,0.000337417,0.000889938,0.003143523,0.001345129,0.001348859,0.0004895806,0.0009141763],"category_scores_gemma":[0.001331562,0.000369572,0.0002962134,0.001369852,0.0009692038,0.0003072582,0.001310176,0.0006999526,0.0001074303],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.02425779,"about_ca_system_score_gemma":0.03227288,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9911035,"about_ca_topic_score_gemma":0.9926415,"domain_scores_codex":[0.9993519,0.00004369002,0.00003248135,0.00008083,0.0002163036,0.0002747291],"domain_scores_gemma":[0.998987,0.00003202596,0.0001519825,0.00002238901,0.0003813147,0.0004252905],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001793506,0.00009757093,0.9760576,0.0001643373,0.00008207258,0.002743657,0.004521901,0.0002412878,0.002064347,0.0001471953,0.00329368,0.01040699],"study_design_scores_gemma":[0.0000148254,0.00006592943,0.9910272,0.00006474808,0.00002172928,0.0005964597,0.005871797,0.0003011512,0.000136284,0.00002252912,0.001863824,0.00001361626],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954985,0.0006194033,0.0001323684,0.0005373961,0.00002441845,0.0002078762,0.00122504,0.00001874654,0.001736245],"genre_scores_gemma":[0.9973246,0.000541679,0.0003543958,0.0003571384,0.00001269744,0.00004018617,0.0006041215,0.000004509438,0.0007606762],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02425779,"threshold_uncertainty_score":0.1760034,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02317224312417895,"score_gpt":0.3080211473223313,"score_spread":0.2848489041981524,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}