{"id":"W2139790819","doi":"10.1016/s1286-4579(00)00273-2","title":"pathogenicity islands: big virulence in small packages","year":2000,"lang":"en","type":"review","venue":"Microbes and Infection","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":462,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Virulence; Pathogenicity island; Biology; Salmonella; Plasmid; Gene; Genetics; Horizontal gene transfer; Pathogenicity; Microbiology; Genome; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002559905,0.0002619456,0.0007493965,0.00003414972,0.0000888674,0.00004245654,0.00009597868,0.0003869502,0.0001596601],"category_scores_gemma":[0.00002223062,0.00009626084,0.0002092229,0.0002760174,0.00004614059,0.00003947301,0.0000513177,0.0002520001,0.00005479767],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002979518,"about_ca_system_score_gemma":0.00000833898,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001258429,"about_ca_topic_score_gemma":0.002630114,"domain_scores_codex":[0.998633,0.0002817012,0.0003767379,0.0004167214,0.00002862704,0.0002632644],"domain_scores_gemma":[0.999566,0.0001815561,0.0001360841,0.00005405001,0.00001163653,0.00005071707],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000002677793,0.0000317845,0.002379888,0.0002567307,0.000008360857,0.000003565588,0.00001070529,6.660719e-8,0.0003033922,0.000006514254,0.00008089039,0.9969154],"study_design_scores_gemma":[0.00004305876,0.0001028635,0.01246497,0.0009504383,0.00005341902,0.00007552035,0.000004902703,6.519447e-7,0.000007842195,0.00009333493,0.985967,0.0002360288],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.1534287,0.845723,0.000001164911,0.00001525064,0.0001606219,0.0002285467,0.00004980451,0.00003435661,0.0003585742],"genre_scores_gemma":[0.00123269,0.9980109,0.000005442198,0.00008752898,0.0003354073,0.00003297055,0.0001662184,0.000001655671,0.000127229],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9966794,"threshold_uncertainty_score":0.3925403,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05616115963463239,"score_gpt":0.2644247399059858,"score_spread":0.2082635802713534,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}