{"id":"W2139850066","doi":"10.1111/j.1462-2920.2007.01307.x","title":"Populations related to <i>Alkanindiges</i> , a novel genus containing obligate alkane degraders, are implicated in biological foaming in activated sludge systems","year":2007,"lang":"en","type":"article","venue":"Environmental Microbiology","topic":"Wastewater Treatment and Nitrogen Removal","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"University of Illinois at Urbana-Champaign; Water Research Foundation; Water Environment Research Foundation; Fonds Québécois de la Recherche sur la Nature et les Technologies; National Science Foundation","keywords":"Biology; Gammaproteobacteria; 16S ribosomal RNA; Activated sludge; Terminal restriction fragment length polymorphism; Ribosomal RNA; Oligomer restriction; Phylogenetic tree; Acinetobacter; Microbiology; Restriction fragment length polymorphism; Bacteria; Gene; Oligonucleotide; Sewage treatment; Genetics; Polymerase chain reaction","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004345002,0.0003772698,0.0004525636,0.0002239971,0.0001327373,0.0000195273,0.0002917562,0.0003719763,0.0001834885],"category_scores_gemma":[0.00001270671,0.0003410553,0.00008214598,0.0004918256,0.0002220222,0.0001243128,0.0003082045,0.0003402719,0.0004969534],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00112556,"about_ca_system_score_gemma":0.00000494212,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001000781,"about_ca_topic_score_gemma":0.000544328,"domain_scores_codex":[0.9973285,0.0001324637,0.000705662,0.0007870108,0.00009084344,0.0009554812],"domain_scores_gemma":[0.9992779,0.00008175153,0.0001948384,0.0002642722,0.000001562335,0.0001796363],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001370397,0.0002355735,0.3245577,0.000001383361,0.0000159343,0.00009817548,0.000467467,0.000290359,0.6738582,0.0000136486,0.00002268332,0.0003018689],"study_design_scores_gemma":[0.002753419,0.0003816724,0.8535474,0.00005204178,0.0000177117,0.0005370715,0.001594133,0.00004323379,0.1375974,0.00005483369,0.002783042,0.0006380732],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981613,0.0002184984,0.00004594268,0.000137814,0.0001815229,0.0008553396,0.00009477248,0.0000629158,0.0002419165],"genre_scores_gemma":[0.9977635,0.00001092212,0.001320884,0.0001886917,0.00001760355,0.00004627058,0.000443042,0.00003507442,0.0001740729],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5362608,"threshold_uncertainty_score":0.9999042,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02380654289587302,"score_gpt":0.2354509140379084,"score_spread":0.2116443711420354,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}