{"id":"W2139852129","doi":"10.1093/infdis/jis933","title":"Abrupt Emergence of a Single Dominant Multidrug-Resistant Strain of Escherichia coli","year":2013,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":269,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Escherichia coli; Multiple drug resistance; Microbiology; Strain (injury); Biology; Virology; Genetics; Drug resistance; Gene; Anatomy","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002936714,0.0001408237,0.0001594519,0.0004620031,0.0002255215,0.0004066659,0.0002250049,0.0002698934,0.0004257561],"category_scores_gemma":[0.0009106667,0.0001295865,0.00008053856,0.0002901105,0.0002989159,0.0002446962,0.0002727409,0.0002252554,0.0001463436],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004011557,"about_ca_system_score_gemma":0.0002350587,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001717732,"about_ca_topic_score_gemma":0.003053248,"domain_scores_codex":[0.99984,0.00001624542,0.00001236839,0.00005854281,0.00003768032,0.00003515221],"domain_scores_gemma":[0.9993718,0.00009767753,0.0002085061,0.00006033529,0.0001216576,0.0001400863],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002954013,0.00003715589,0.8519316,0.00004842876,0.00002143049,0.001524097,0.0004120494,0.0002301569,0.1238292,0.0002031648,0.0002231512,0.02124428],"study_design_scores_gemma":[0.000006324951,0.000185908,0.9863855,0.00001625449,0.00001762687,0.003425353,0.0002550462,0.0004789211,0.008216794,0.0001020242,0.0009027038,0.000007538118],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.999247,0.0001189303,0.0003040974,0.00003539792,0.000001500621,0.000005032179,0.00003134192,0.000008088841,0.0002485832],"genre_scores_gemma":[0.9993394,0.00008132315,0.0003864385,0.00003588626,0.000005651419,0.00000161681,0.00007446884,0.000001627326,0.00007365573],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001717732,"threshold_uncertainty_score":0.003415525,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00695287814000055,"score_gpt":0.2366272938686195,"score_spread":0.2296744157286189,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}