{"id":"W2139856280","doi":"10.1093/bioinformatics/bts392","title":"Fractionation, rearrangement and subgenome dominance","year":2012,"lang":"en","type":"article","venue":"Bioinformatics","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Fractionation; Polyploid; Biology; Gene duplication; Genome; Computer science; Gene; Genetics; Chemistry; Chromatography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001260608,0.0003791689,0.0004222198,0.0006497697,0.0004869904,0.0008663206,0.0007126887,0.0005221979,0.00257813],"category_scores_gemma":[0.006871547,0.0002413642,0.0004334528,0.0008543159,0.001203255,0.001298459,0.001158854,0.0007817482,0.0003421549],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007126056,"about_ca_system_score_gemma":0.0006925169,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002677566,"about_ca_topic_score_gemma":0.002649032,"domain_scores_codex":[0.9994553,0.0001030486,0.00003298683,0.0002212215,0.0001266385,0.00006080651],"domain_scores_gemma":[0.9964746,0.002044652,0.0006263584,0.0004311534,0.0002555189,0.000167748],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0009633574,0.000125104,0.07159021,0.0006592554,0.0001193229,0.0004861077,0.00103037,0.2193747,0.2378694,0.105002,0.00234571,0.3604344],"study_design_scores_gemma":[0.0001071837,0.0003582273,0.03318711,0.00006859394,0.00009039931,0.001130245,0.000328662,0.6725363,0.1724942,0.1083468,0.01127993,0.00007250092],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.4392892,0.0008898785,0.5544162,0.0003940345,0.00004437339,0.0000970744,0.0001528427,0.0008665591,0.00384982],"genre_scores_gemma":[0.868574,0.0003097585,0.1287968,0.0001767246,0.00002379123,0.00006395428,0.0002889184,0.0002139162,0.001552066],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.002677566,"threshold_uncertainty_score":0.008624732,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01092537070643445,"score_gpt":0.2350080116373403,"score_spread":0.2240826409309058,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}