{"id":"W2140017951","doi":"10.1186/1743-422x-11-188","title":"Complete genome sequence of bacteriophage vB_YenP_AP5 which infects Yersinia enterocoliticaof serotype O:3","year":2014,"lang":"en","type":"article","venue":"Virology Journal","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"University of Guelph; Ontario Ministry of Agriculture, Food and Rural Affairs; Helsingin Yliopisto","keywords":"Biology; Lytic cycle; Bacteriophage; Podoviridae; Yersinia; Genome; Virology; Siphoviridae; Genomic organization; Genetics; Whole genome sequencing; Microbiology; Virus; Gene; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001827987,0.0005838472,0.0005081219,0.0009664904,0.0004457839,0.000490869,0.000377341,0.0004971616,0.003700072],"category_scores_gemma":[0.0003789154,0.0002197632,0.0006825594,0.001366154,0.0002081798,0.0002895104,0.0002331919,0.0006748684,0.001633027],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005729828,"about_ca_system_score_gemma":0.0009943215,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00535519,"about_ca_topic_score_gemma":0.002955526,"domain_scores_codex":[0.9998605,0.00001565183,0.00001391662,0.0000450506,0.00004013424,0.00002467021],"domain_scores_gemma":[0.9997204,0.00006700918,0.0000656089,0.00002075677,0.00006334798,0.00006280024],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00188525,0.0001351001,0.00606512,0.001767782,0.00006962693,0.0007800598,0.0004254525,0.0007186642,0.9536208,0.0006688588,0.002354046,0.03150934],"study_design_scores_gemma":[0.0004210943,0.002106957,0.4833066,0.0007432761,0.0006998286,0.004430487,0.0008853414,0.003778784,0.2853848,0.001366333,0.2167168,0.000159607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7415659,0.007781144,0.02401222,0.0004288482,0.0002256035,0.0003938759,0.2169832,0.0005542909,0.00805495],"genre_scores_gemma":[0.3635462,0.00313644,0.02875666,0.0001505709,0.00008228384,0.0001916994,0.5978565,0.0002359993,0.006043559],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00535519,"threshold_uncertainty_score":0.01237798,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01326397531336629,"score_gpt":0.2394646120076686,"score_spread":0.2262006366943023,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}