{"id":"W2140022978","doi":"10.1139/g06-087","title":"Construction and characterization of two BAC libraries from<i>Brachypodium distachyon</i>, a new model for grass genomics","year":2006,"lang":"en","type":"article","venue":"Genome","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Brachypodium distachyon; Brachypodium; Genome; Biology; Bacterial artificial chromosome; Genetics; Genome size; Genomic library; Ploidy; Whole genome sequencing; Genomics; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003913757,0.0001252981,0.0001581327,0.00002435835,0.00006951402,0.00002653579,0.00007764912,0.00007078074,0.000002006759],"category_scores_gemma":[0.000005567245,0.0001310582,0.00005250999,0.00002946765,0.00008810774,0.000002399558,0.00008025018,0.00002389743,4.50339e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000007148446,"about_ca_system_score_gemma":0.00007238932,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007467414,"about_ca_topic_score_gemma":0.00004754017,"domain_scores_codex":[0.9993478,0.00000990339,0.0002082928,0.0002487774,0.00004112305,0.0001441125],"domain_scores_gemma":[0.9996245,0.000008239748,0.0001189499,0.0001624423,0.00004488317,0.00004101882],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006374108,0.00001503688,0.002837552,0.00001290841,0.00004037672,7.818904e-8,0.00008080925,0.000367583,0.9945161,0.001044065,0.00002579468,0.0009959509],"study_design_scores_gemma":[0.003227607,0.0003275773,0.1197284,0.000009803606,0.0001892253,0.00001007201,0.0001075781,0.004993571,0.7962785,0.03927585,0.03510376,0.0007480731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.912246,0.001045313,0.08562215,0.00008760185,0.00008436355,0.0002093893,0.0006036889,0.000003496089,0.00009803905],"genre_scores_gemma":[0.9719546,0.0002643925,0.02598991,0.00006840601,0.0003884738,0.00001706386,0.0009668339,0.00002144389,0.000328845],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1982376,"threshold_uncertainty_score":0.5344396,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008800919954245926,"score_gpt":0.1988463672277376,"score_spread":0.1900454472734917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}