{"id":"W2140145998","doi":"10.1128/iai.71.6.3310-3319.2003","title":"Secretin of the Enteropathogenic<i>Escherichia coli</i>Type III Secretion System Requires Components of the Type III Apparatus for Assembly and Localization","year":2003,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":159,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México; Medical Research Council; Canadian Institutes of Health Research; Medical Research Council Canada; Michael Smith Health Research BC; Howard Hughes Medical Institute","keywords":"Biology; Mutant; Escherichia coli; Periplasmic space; Secretion; Cell fractionation; Virulence; Bacterial outer membrane; Wild type; Enteropathogenic Escherichia coli; Effector; Cytoplasm; Biochemistry; Microbiology; Membrane; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003948618,0.00009030913,0.0001306145,0.00001725874,0.0002501904,0.00001224793,0.00007106795,0.00008652148,0.000001426446],"category_scores_gemma":[0.0002670908,0.00006134191,0.00004887247,0.0001711262,0.0001591137,0.000006253973,0.0001161355,0.00008547652,1.227683e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001608807,"about_ca_system_score_gemma":0.00004774876,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000238901,"about_ca_topic_score_gemma":0.00008172978,"domain_scores_codex":[0.9991116,0.0003863748,0.0001868343,0.0001173949,0.00009422629,0.0001036064],"domain_scores_gemma":[0.9993042,0.00002659719,0.0001554935,0.0002206878,0.0002690485,0.00002398085],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001737995,0.00004366119,0.03601676,0.0001376363,0.00005182439,2.202203e-8,0.0001032394,0.00002685499,0.9629796,0.0003345891,0.0000767177,0.00005526321],"study_design_scores_gemma":[0.002776247,0.00125012,0.3897533,0.0002572108,0.0001276562,0.00001829228,0.0007260786,0.003831831,0.581029,0.00007368367,0.01987984,0.0002767445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965551,0.0006145315,0.001723846,0.00001409045,0.0002543322,0.0004166859,0.000007610113,0.000005631431,0.000408114],"genre_scores_gemma":[0.9993147,0.0004693654,0.00003111452,0.000035284,0.00001774481,0.00001643073,0.00001769477,0.000007948004,0.000089717],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3819506,"threshold_uncertainty_score":0.250145,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01806938810224707,"score_gpt":0.2664639680348685,"score_spread":0.2483945799326215,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}