{"id":"W2140146732","doi":"10.1086/346048","title":"Chlamydia Trachomatis<i>omp1</i>Genotypic Diversity and Concordance with Sexual Network Data","year":2003,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"Manitoba Health; University of Ottawa; University of Manitoba","funders":"","keywords":"Contact tracing; Concordance; Chlamydia trachomatis; Chlamydia; Sexual contact; Genotype; Sexually transmitted disease; Transmission (telecommunications); Biology; Medicine; Virology; Immunology; Genetics; Telecommunications; Computer science; Disease; Infectious disease (medical specialty); Gonorrhea; Pathology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006267075,0.0001949579,0.0003061266,0.002163497,0.0005739841,0.00127676,0.0003643204,0.0002795106,0.0007239832],"category_scores_gemma":[0.03201566,0.0001464839,0.0002438291,0.002070039,0.000537991,0.0004837082,0.0007941444,0.0003523749,0.00009366842],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004525658,"about_ca_system_score_gemma":0.0004442804,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01098839,"about_ca_topic_score_gemma":0.01691665,"domain_scores_codex":[0.9955249,0.002658542,0.000290698,0.0004971807,0.0007641078,0.0002643878],"domain_scores_gemma":[0.9707657,0.01849488,0.005777935,0.002410976,0.002078133,0.0004723501],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001028951,0.00001548117,0.988442,0.00004547181,0.0001162236,0.0001037296,0.001028558,0.001387859,0.001203635,0.0003245872,0.00009099832,0.007138622],"study_design_scores_gemma":[0.000004969829,0.00008351645,0.984731,0.00003514305,0.00005333931,0.0004502104,0.000855715,0.01086462,0.001565695,0.0007761124,0.0005663526,0.00001335327],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956735,0.0001265512,0.002663856,0.00005576269,0.000003475307,0.00002024548,0.0004179274,0.000009972255,0.001028668],"genre_scores_gemma":[0.9985141,0.00003704684,0.001107775,0.000004491271,0.000003622997,0.000006103488,0.0002687947,0.000002117484,0.00005600317],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01098839,"threshold_uncertainty_score":0.03314382,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02440007384428308,"score_gpt":0.2622712225924634,"score_spread":0.2378711487481803,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}