{"id":"W2140150379","doi":"10.1128/iai.69.10.6323-6335.2001","title":"Locus of Enterocyte Effacement from <i>Citrobacter rodentium</i> : Sequence Analysis and Evidence for Horizontal Transfer among Attaching and Effacing Pathogens","year":2001,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":219,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Medical Research Council; Canadian Institutes of Health Research","keywords":"Citrobacter rodentium; Biology; Enteropathogenic Escherichia coli; Intimin; Pathogenicity island; Plasmid; Citrobacter; Microbiology; Shigella; Genetics; Mobile genetic elements; Enterobacteriaceae; Locus (genetics); Escherichia coli; Complete sequence; Sequence analysis; Gene; Pathogen; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001419928,0.0003488411,0.0002164805,0.0004081921,0.0001474668,0.0002650195,0.0002610277,0.0003351932,0.0006136602],"category_scores_gemma":[0.0004091327,0.0001274648,0.0003974608,0.0003421182,0.0001934023,0.0001272089,0.0002145144,0.0003014346,0.0004527653],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001900618,"about_ca_system_score_gemma":0.0001834813,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008620368,"about_ca_topic_score_gemma":0.000759848,"domain_scores_codex":[0.9998401,0.00002095049,0.00002291352,0.00004056705,0.00003449566,0.00004102626],"domain_scores_gemma":[0.9994648,0.00009996037,0.0002086188,0.00005227716,0.00007562074,0.00009874174],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001759971,0.00004916087,0.003348746,0.00009777515,0.00001314534,0.0003543125,0.00007886444,0.00006267607,0.9930165,0.00005114267,0.00002861513,0.002723009],"study_design_scores_gemma":[0.00006589452,0.001700767,0.3099639,0.0001311726,0.0001937095,0.008382163,0.0004677026,0.001139825,0.6699519,0.0001508208,0.007794961,0.00005725157],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965312,0.0005971653,0.001541605,0.00003373251,0.000009124963,0.00002865048,0.0006807339,0.0000251815,0.0005526068],"genre_scores_gemma":[0.9890238,0.0004997815,0.004627272,0.00006951142,0.00001808066,0.00002647828,0.005232247,0.00002422856,0.0004786007],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008620368,"threshold_uncertainty_score":0.002052903,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03718589083965214,"score_gpt":0.3206777503269063,"score_spread":0.2834918594872542,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}