{"id":"W2140258750","doi":"10.1128/jvi.00179-11","title":"Strong Human Endogenous Retrovirus-Specific T Cell Responses Are Associated with Control of HIV-1 in Chronic Infection","year":2011,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Center for Research Resources; Fogarty International Center; University of California, San Francisco; Center for AIDS Research, University of Washington; National Institutes of Health; Consejo Nacional de Ciencia y Tecnología; Ragon Institute of MGH, MIT and Harvard; National Institute of Allergy and Infectious Diseases; Pfizer","keywords":"Biology; ELISPOT; Immunology; Viremia; Viral load; Virology; T cell; Peripheral blood mononuclear cell; CD8; Epitope; Immune system; Antibody; Virus; In vitro; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002790529,0.000249047,0.0003375789,0.0005021883,0.0003559732,0.0005258675,0.0001362687,0.0003068943,0.001600464],"category_scores_gemma":[0.0008980421,0.0002366064,0.0001180096,0.0003160558,0.0003576023,0.0002529949,0.0003094746,0.0004641998,0.0001796321],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001577254,"about_ca_system_score_gemma":0.0001158499,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004655593,"about_ca_topic_score_gemma":0.0004537565,"domain_scores_codex":[0.999781,0.00004439395,0.00002396866,0.00005427581,0.00003679096,0.00005965848],"domain_scores_gemma":[0.9990695,0.0001977699,0.0003970616,0.00006670486,0.0000885307,0.0001804595],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001090044,0.0001585989,0.9100279,0.00007129931,0.00005185864,0.0008210352,0.0004497072,0.00008560471,0.07779352,0.00007624239,0.000156256,0.009218035],"study_design_scores_gemma":[0.0000209486,0.0004874012,0.9945873,0.00001205529,0.00002764873,0.001930237,0.0001923072,0.0001200597,0.002225182,0.00008242555,0.0003084926,0.000005929056],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993483,0.0003429523,0.00003942054,0.00001242916,0.000002311833,0.000003971163,0.00003203016,0.000003327499,0.0002152242],"genre_scores_gemma":[0.9996046,0.0001141893,0.00004731583,0.0000174413,0.00001429949,0.000003285999,0.00006729324,0.000001534042,0.0001299485],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001600464,"threshold_uncertainty_score":0.005354106,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04733094998827193,"score_gpt":0.2207565579539451,"score_spread":0.1734256079656731,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}