{"id":"W2140523802","doi":"10.1128/jb.00002-07","title":"Repression of Intracellular Virulence Factors in <i>Salmonella</i> by the Hha and YdgT Nucleoid-Associated Proteins","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; University of Guelph; Public Health Agency of Canada","funders":"","keywords":"Biology; Virulence; Nucleoid; Pathogenicity island; Repressor; Intracellular; Salmonella enterica; Gene; Psychological repression; Gene silencing; Salmonella; Microbiology; Operon; Genetics; Bacteria; Gene expression; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009355416,0.0001943816,0.0001476449,0.0001050316,0.0001038433,0.0002751616,0.0000953197,0.0001282623,0.0009625257],"category_scores_gemma":[0.0001417301,0.00009249264,0.0001550325,0.00004483734,0.0002662031,0.0001233263,0.0002548067,0.0002977835,0.0003534617],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002431209,"about_ca_system_score_gemma":0.0002240768,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001260902,"about_ca_topic_score_gemma":0.001768947,"domain_scores_codex":[0.9999055,0.00001430103,0.000005582339,0.00001969118,0.00002580046,0.0000291904],"domain_scores_gemma":[0.9998127,0.0000345302,0.00005903947,0.00002222612,0.00002907052,0.0000425245],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003646413,0.000004073487,0.0004290201,0.000005969188,7.620498e-7,0.00001176585,0.000006286371,0.000007315994,0.9991455,0.00002754584,0.00001362704,0.0003117612],"study_design_scores_gemma":[0.000008439814,0.0002466889,0.03604485,0.000003979317,0.000007042837,0.0003103724,0.00009502509,0.0006856706,0.9610838,0.00008012017,0.001429049,0.000004986233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974751,0.0004182841,0.001227418,0.00004877664,0.000008286152,0.000004003327,0.0001039545,0.00003192524,0.0006821677],"genre_scores_gemma":[0.9973875,0.0001125005,0.001111999,0.00002724696,0.000005228178,0.000006195999,0.0002598794,0.00001428429,0.001075244],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001260902,"threshold_uncertainty_score":0.003219962,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01614792214684967,"score_gpt":0.2321739257009875,"score_spread":0.2160260035541379,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}