{"id":"W2140609887","doi":"10.1186/s40364-015-0031-6","title":"A genome wide association study on Newfoundland colorectal cancer patients’ survival outcomes","year":2015,"lang":"en","type":"article","venue":"Biomarker Research","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"ca_institutions":"Memorial University of Newfoundland; Princess Margaret Cancer Centre; Public Health Ontario; University of Toronto","funders":"National Cancer Institute; Canadian Institutes of Health Research; University of Toronto","keywords":"Single-nucleotide polymorphism; Colorectal cancer; Medicine; Microsatellite instability; Oncology; Internal medicine; Proportional hazards model; SNP; Genome-wide association study; Cohort; Genetic association; Genotype; Cancer; Genetics; Biology; Microsatellite; Gene; Allele","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003183646,0.0001439837,0.0002314137,0.0001133325,0.0001654223,0.00004315052,0.0002375059,0.0002008572,0.00003469631],"category_scores_gemma":[0.003864231,0.0001216904,0.00007292883,0.0002289882,0.00005105906,0.000003552607,0.0002070197,0.0001624886,0.00008749714],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004237367,"about_ca_system_score_gemma":0.0002305259,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009903653,"about_ca_topic_score_gemma":0.002064009,"domain_scores_codex":[0.9971014,0.00103958,0.0002615604,0.0004196107,0.0006465014,0.000531308],"domain_scores_gemma":[0.9984834,0.0003105028,0.0001066685,0.0002507276,0.000668079,0.0001806185],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001817867,0.0004826602,0.9870344,0.000001809326,0.0002035639,0.000001331394,0.0001304677,0.00001132027,0.001849173,0.0000026661,0.009919952,0.0001808878],"study_design_scores_gemma":[0.001539009,0.001059492,0.9842815,0.000001790873,0.00001120115,8.994913e-8,0.0003115858,0.00001242197,0.00006091129,0.00003727192,0.01254929,0.000135422],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946105,0.00009328561,0.00001630644,0.001009217,0.0003711325,0.0005709527,0.00004367613,0.00001119238,0.003273725],"genre_scores_gemma":[0.9958439,0.00002785468,0.00002983157,0.0001246825,0.0001476782,0.0001655106,0.0001455392,0.00002247613,0.003492516],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002752869,"threshold_uncertainty_score":0.496239,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1005178699454992,"score_gpt":0.3980827289943921,"score_spread":0.297564859048893,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}